Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 KLHL8-208ENST00000512111 3245 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
LHX6Q9UPM6 CAST-213ENST00000504465 2336 ntAPPRIS ALT2 TSL 2 BASIC7.95□□□□□ -1.14
LHX6Q9UPM6 CDK19-201ENST00000323817 6067 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
LHX6Q9UPM6 IKZF2-202ENST00000374319 2001 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
LHX6Q9UPM6 SPATA31E3P-201ENST00000613133 4214 ntBASIC7.95□□□□□ -1.14
LHX6Q9UPM6 SLC8A1-204ENST00000405269 2965 ntTSL 5 BASIC7.95□□□□□ -1.14
LHX6Q9UPM6 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
LHX6Q9UPM6 ACLY-207ENST00000590151 4309 ntAPPRIS P4 TSL 1 (best) BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 MTF1-201ENST00000373036 7972 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 TSPAN31-206ENST00000547992 3434 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 LINC02447-201ENST00000499242 1500 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 ARNTL2-203ENST00000311001 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 NOTCH2-207ENST00000602566 5046 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 ARMCX3-207ENST00000537169 3318 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 MIPOL1-211ENST00000556451 2282 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 SCN11A-201ENST00000302328 6500 ntAPPRIS P2 TSL 5 BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 ZFP30-204ENST00000514101 4440 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 USP40-203ENST00000427112 3744 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 ITIH3-211ENST00000621946 3038 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 MBP-206ENST00000397863 4800 ntTSL 3 BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 XRCC5-202ENST00000392133 3761 ntAPPRIS P1 TSL 5 BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 USP13-203ENST00000496897 2747 ntTSL 2 BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 OR56A5-201ENST00000340110 738 ntBASIC7.94□□□□□ -1.14
LHX6Q9UPM6 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 ATP5J2-202ENST00000359832 323 ntTSL 2 BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 RNA5SP218-201ENST00000363188 109 ntBASIC7.94□□□□□ -1.14
LHX6Q9UPM6 Y_RNA.106-201ENST00000363189 100 ntBASIC7.94□□□□□ -1.14
LHX6Q9UPM6 Y_RNA.222-201ENST00000364264 102 ntBASIC7.94□□□□□ -1.14
LHX6Q9UPM6 SNORA73A-201ENST00000364938 206 ntBASIC7.94□□□□□ -1.14
LHX6Q9UPM6 Y_RNA.376-201ENST00000365638 108 ntBASIC7.94□□□□□ -1.14
LHX6Q9UPM6 IGLV1-51-201ENST00000390290 389 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 PHBP1-201ENST00000392260 808 ntBASIC7.94□□□□□ -1.14
LHX6Q9UPM6 HMGB1P17-201ENST00000403495 628 ntBASIC7.94□□□□□ -1.14
LHX6Q9UPM6 SNORA73.3-201ENST00000410213 189 ntBASIC7.94□□□□□ -1.14
LHX6Q9UPM6 RNU2-36P-201ENST00000410361 191 ntBASIC7.94□□□□□ -1.14
LHX6Q9UPM6 RNU2-23P-201ENST00000410545 195 ntBASIC7.94□□□□□ -1.14
LHX6Q9UPM6 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 AL357552.2-201ENST00000433876 353 ntTSL 5 BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 RPS20P5-201ENST00000434808 360 ntBASIC7.94□□□□□ -1.14
LHX6Q9UPM6 AC112493.1-202ENST00000436019 673 ntTSL 3 BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 AL138799.3-201ENST00000438968 350 ntBASIC7.94□□□□□ -1.14
LHX6Q9UPM6 AL590609.1-201ENST00000442164 328 ntBASIC7.94□□□□□ -1.14
LHX6Q9UPM6 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 OR52I1-201ENST00000450052 1050 ntBASIC7.94□□□□□ -1.14
LHX6Q9UPM6 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 HNRNPDLP3-201ENST00000456745 380 ntBASIC7.94□□□□□ -1.14
LHX6Q9UPM6 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 RPL7L1P8-201ENST00000469911 741 ntBASIC7.94□□□□□ -1.14
LHX6Q9UPM6 RN7SL392P-201ENST00000473024 299 ntBASIC7.94□□□□□ -1.14
LHX6Q9UPM6 SNHG12-207ENST00000475441 444 ntTSL 3 BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 RN7SL333P-201ENST00000476398 297 ntBASIC7.94□□□□□ -1.14
LHX6Q9UPM6 AC112719.1-201ENST00000477971 315 ntBASIC7.94□□□□□ -1.14
LHX6Q9UPM6 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 AC079080.1-201ENST00000479841 822 ntBASIC7.94□□□□□ -1.14
LHX6Q9UPM6 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 Y_RNA.654-201ENST00000497848 106 ntBASIC7.94□□□□□ -1.14
LHX6Q9UPM6 PSMA2P2-201ENST00000504319 686 ntBASIC7.94□□□□□ -1.14
LHX6Q9UPM6 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 OR56A5-202ENST00000532411 942 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 SRSF5-209ENST00000555349 565 ntTSL 4 BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 Z98751.3-201ENST00000604447 521 ntBASIC7.94□□□□□ -1.14
LHX6Q9UPM6 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 MIR6813-201ENST00000621638 56 ntBASIC7.94□□□□□ -1.14
LHX6Q9UPM6 HBG1-202ENST00000632727 369 ntTSL 3 BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 UBLCP1-201ENST00000296786 2392 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 TPH2-201ENST00000333850 2360 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 LINC00410-201ENST00000419272 2018 ntTSL 2 BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 SUMO2-202ENST00000420826 3190 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 AC245060.6-201ENST00000624350 8420 ntBASIC7.94□□□□□ -1.14
LHX6Q9UPM6 NBPF14-205ENST00000614329 2051 ntTSL 5 BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 NBPF14-207ENST00000616120 2051 ntTSL 5 BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 PEG10-202ENST00000482108 6618 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 ZNF80-202ENST00000482457 2471 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 RSU1-205ENST00000602389 3639 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 SERPINB4-201ENST00000341074 1749 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 LTBP1-207ENST00000418533 5164 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 CCR9-203ENST00000395963 2512 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 ARMC8-215ENST00000471453 2910 ntTSL 2 BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 SMAP2-206ENST00000614549 2570 ntTSL 1 (best) BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 ZNF763-201ENST00000343949 2621 ntAPPRIS P2 TSL 2 BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 OR8G1-202ENST00000641972 5055 ntAPPRIS P1 BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 ALB-219ENST00000621085 1418 ntTSL 5 BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 GTF2H2-201ENST00000274400 4336 ntAPPRIS P1 TSL 1 (best) BASIC7.94□□□□□ -1.14
LHX6Q9UPM6 SLC25A13-201ENST00000265631 3136 ntAPPRIS P3 TSL 1 (best) BASIC7.94□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 149.8 ms