Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 MAST4-IT1-201ENST00000514241 658 ntBASIC5.73□□□□□ -1.49
PACSIN3Q9UKS6 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PACSIN3Q9UKS6 AC078899.1-201ENST00000521432 1185 ntBASIC5.73□□□□□ -1.49
PACSIN3Q9UKS6 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PACSIN3Q9UKS6 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PACSIN3Q9UKS6 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC5.73□□□□□ -1.49
PACSIN3Q9UKS6 NPIPB14P-203ENST00000532298 987 ntBASIC5.73□□□□□ -1.49
PACSIN3Q9UKS6 AC084121.1-201ENST00000533882 835 ntBASIC5.73□□□□□ -1.49
PACSIN3Q9UKS6 TOMM20P1-201ENST00000534518 427 ntBASIC5.73□□□□□ -1.49
PACSIN3Q9UKS6 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
PACSIN3Q9UKS6 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.73□□□□□ -1.49
PACSIN3Q9UKS6 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.73□□□□□ -1.49
PACSIN3Q9UKS6 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.73□□□□□ -1.49
PACSIN3Q9UKS6 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC5.73□□□□□ -1.49
PACSIN3Q9UKS6 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.73□□□□□ -1.49
PACSIN3Q9UKS6 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC5.73□□□□□ -1.49
PACSIN3Q9UKS6 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.73□□□□□ -1.49
PACSIN3Q9UKS6 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.73□□□□□ -1.49
PACSIN3Q9UKS6 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC5.73□□□□□ -1.49
PACSIN3Q9UKS6 AC002310.3-201ENST00000569728 723 ntBASIC5.73□□□□□ -1.49
PACSIN3Q9UKS6 OR1E3-201ENST00000575608 948 ntBASIC5.73□□□□□ -1.49
PACSIN3Q9UKS6 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.73□□□□□ -1.49
PACSIN3Q9UKS6 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.73□□□□□ -1.49
PACSIN3Q9UKS6 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.73□□□□□ -1.49
PACSIN3Q9UKS6 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PACSIN3Q9UKS6 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC5.73□□□□□ -1.49
PACSIN3Q9UKS6 AC064872.1-201ENST00000604823 1072 ntBASIC5.73□□□□□ -1.49
PACSIN3Q9UKS6 AC008555.7-201ENST00000605008 583 ntBASIC5.73□□□□□ -1.49
PACSIN3Q9UKS6 SNORA74.4-201ENST00000607595 199 ntBASIC5.73□□□□□ -1.49
PACSIN3Q9UKS6 AC093673.2-201ENST00000609674 331 ntBASIC5.73□□□□□ -1.49
PACSIN3Q9UKS6 WT1-AS_8.1-201ENST00000615200 275 ntBASIC5.73□□□□□ -1.49
PACSIN3Q9UKS6 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
PACSIN3Q9UKS6 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.73□□□□□ -1.49
PACSIN3Q9UKS6 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.73□□□□□ -1.49
PACSIN3Q9UKS6 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC5.73□□□□□ -1.49
PACSIN3Q9UKS6 DRG1-207ENST00000629688 309 ntTSL 5 BASIC5.73□□□□□ -1.49
PACSIN3Q9UKS6 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.73□□□□□ -1.49
PACSIN3Q9UKS6 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.73□□□□□ -1.49
PACSIN3Q9UKS6 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.73□□□□□ -1.49
PACSIN3Q9UKS6 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
PACSIN3Q9UKS6 CASC19-246ENST00000641625 1606 ntBASIC5.73□□□□□ -1.49
PACSIN3Q9UKS6 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PACSIN3Q9UKS6 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PACSIN3Q9UKS6 AC053481.2-202ENST00000582394 1500 ntBASIC5.73□□□□□ -1.49
PACSIN3Q9UKS6 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
PACSIN3Q9UKS6 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.73□□□□□ -1.49
PACSIN3Q9UKS6 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.73□□□□□ -1.49
PACSIN3Q9UKS6 EIF3EP1-201ENST00000433978 1316 ntBASIC5.73□□□□□ -1.49
PACSIN3Q9UKS6 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PACSIN3Q9UKS6 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 AC140479.2-201ENST00000421567 3130 ntBASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 RN7SKP166-201ENST00000410812 305 ntBASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 USP9YP26-201ENST00000421008 661 ntBASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 RPL7AP14-201ENST00000424041 802 ntBASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 RNF19BPX-201ENST00000426224 625 ntBASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 AL390023.1-201ENST00000428836 262 ntBASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 RPL23AP60-201ENST00000450011 454 ntBASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 RN7SL254P-201ENST00000460609 284 ntBASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 AC008379.1-201ENST00000463655 464 ntBASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 RPL23AP40-201ENST00000487630 390 ntBASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 OR9N1P-202ENST00000494289 481 ntBASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 MTCO1P31-201ENST00000506355 492 ntBASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 SNX18P25-201ENST00000510539 758 ntBASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 ZDHHC20P3-201ENST00000531576 336 ntBASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC5.72□□□□□ -1.49
PACSIN3Q9UKS6 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 122.8 ms