Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.45□□□□□ -1.38
SCN11AQ9UI33 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
SCN11AQ9UI33 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SCN11AQ9UI33 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SCN11AQ9UI33 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC6.45□□□□□ -1.38
SCN11AQ9UI33 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
SCN11AQ9UI33 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SCN11AQ9UI33 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SCN11AQ9UI33 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.45□□□□□ -1.38
SCN11AQ9UI33 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
SCN11AQ9UI33 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC6.45□□□□□ -1.38
SCN11AQ9UI33 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.44□□□□□ -1.38
SCN11AQ9UI33 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
SCN11AQ9UI33 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SCN11AQ9UI33 AC119751.6-201ENST00000416712 186 ntBASIC6.44□□□□□ -1.38
SCN11AQ9UI33 AL354868.1-201ENST00000417077 482 ntBASIC6.44□□□□□ -1.38
SCN11AQ9UI33 AC021876.1-201ENST00000425959 359 ntBASIC6.44□□□□□ -1.38
SCN11AQ9UI33 NRBF2P3-201ENST00000432731 865 ntBASIC6.44□□□□□ -1.38
SCN11AQ9UI33 SCAND3P1-201ENST00000439854 1060 ntBASIC6.44□□□□□ -1.38
SCN11AQ9UI33 AC016772.1-201ENST00000444170 1261 ntBASIC6.44□□□□□ -1.38
SCN11AQ9UI33 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC6.44□□□□□ -1.38
SCN11AQ9UI33 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC6.44□□□□□ -1.38
SCN11AQ9UI33 AL049839.1-201ENST00000556151 657 ntBASIC6.44□□□□□ -1.38
SCN11AQ9UI33 AC116553.2-201ENST00000564203 463 ntBASIC6.44□□□□□ -1.38
SCN11AQ9UI33 MYLK-221ENST00000583087 678 ntTSL 4 BASIC6.44□□□□□ -1.38
SCN11AQ9UI33 AC108359.1-201ENST00000616451 1211 ntBASIC6.44□□□□□ -1.38
SCN11AQ9UI33 AL022401.1-201ENST00000619498 108 ntBASIC6.44□□□□□ -1.38
SCN11AQ9UI33 AC021422.1-201ENST00000621212 473 ntBASIC6.44□□□□□ -1.38
SCN11AQ9UI33 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
SCN11AQ9UI33 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
SCN11AQ9UI33 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC6.44□□□□□ -1.38
SCN11AQ9UI33 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
SCN11AQ9UI33 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
SCN11AQ9UI33 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.44□□□□□ -1.38
SCN11AQ9UI33 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC6.44□□□□□ -1.38
SCN11AQ9UI33 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC6.44□□□□□ -1.38
SCN11AQ9UI33 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
SCN11AQ9UI33 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
SCN11AQ9UI33 GLULP6-201ENST00000399502 913 ntBASIC6.44□□□□□ -1.38
SCN11AQ9UI33 RPS4XP9-201ENST00000405151 780 ntBASIC6.44□□□□□ -1.38
SCN11AQ9UI33 BX510359.2-201ENST00000417920 305 ntBASIC6.44□□□□□ -1.38
SCN11AQ9UI33 OR5M12P-201ENST00000423388 929 ntBASIC6.44□□□□□ -1.38
SCN11AQ9UI33 AL161747.1-201ENST00000480068 358 ntBASIC6.44□□□□□ -1.38
SCN11AQ9UI33 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC6.44□□□□□ -1.38
SCN11AQ9UI33 OR5M2P-201ENST00000529003 936 ntBASIC6.44□□□□□ -1.38
SCN11AQ9UI33 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC6.44□□□□□ -1.38
SCN11AQ9UI33 AC022884.2-201ENST00000578535 580 ntBASIC6.44□□□□□ -1.38
SCN11AQ9UI33 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC6.44□□□□□ -1.38
SCN11AQ9UI33 AL392048.1-201ENST00000613946 534 ntBASIC6.44□□□□□ -1.38
SCN11AQ9UI33 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC6.44□□□□□ -1.38
SCN11AQ9UI33 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
SCN11AQ9UI33 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SCN11AQ9UI33 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SCN11AQ9UI33 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.43□□□□□ -1.38
SCN11AQ9UI33 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SCN11AQ9UI33 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SCN11AQ9UI33 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.43□□□□□ -1.38
SCN11AQ9UI33 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
SCN11AQ9UI33 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
SCN11AQ9UI33 AL136116.2-201ENST00000404020 785 ntBASIC6.43□□□□□ -1.38
SCN11AQ9UI33 AC009238.2-201ENST00000431026 355 ntBASIC6.43□□□□□ -1.38
SCN11AQ9UI33 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.43□□□□□ -1.38
SCN11AQ9UI33 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC6.43□□□□□ -1.38
SCN11AQ9UI33 AC006967.1-201ENST00000467608 589 ntBASIC6.43□□□□□ -1.38
SCN11AQ9UI33 RPL12P20-201ENST00000475538 479 ntBASIC6.43□□□□□ -1.38
SCN11AQ9UI33 RNU4ATAC18P-201ENST00000516179 126 ntBASIC6.43□□□□□ -1.38
SCN11AQ9UI33 RN7SKP276-201ENST00000516242 268 ntBASIC6.43□□□□□ -1.38
SCN11AQ9UI33 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
SCN11AQ9UI33 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC6.43□□□□□ -1.38
SCN11AQ9UI33 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC6.43□□□□□ -1.38
SCN11AQ9UI33 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC6.43□□□□□ -1.38
SCN11AQ9UI33 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC6.43□□□□□ -1.38
SCN11AQ9UI33 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.43□□□□□ -1.38
SCN11AQ9UI33 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SCN11AQ9UI33 C6orf89-204ENST00000480824 6861 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
SCN11AQ9UI33 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.43□□□□□ -1.38
SCN11AQ9UI33 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC6.43□□□□□ -1.38
SCN11AQ9UI33 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
SCN11AQ9UI33 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.43□□□□□ -1.38
SCN11AQ9UI33 AC005831.1-201ENST00000624384 1697 ntBASIC6.42□□□□□ -1.38
SCN11AQ9UI33 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.42□□□□□ -1.38
SCN11AQ9UI33 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SCN11AQ9UI33 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SCN11AQ9UI33 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
SCN11AQ9UI33 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SCN11AQ9UI33 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SCN11AQ9UI33 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SCN11AQ9UI33 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
SCN11AQ9UI33 SNORA73.1-201ENST00000363107 205 ntBASIC6.42□□□□□ -1.38
SCN11AQ9UI33 OR1L6-202ENST00000373684 1044 ntBASIC6.42□□□□□ -1.38
SCN11AQ9UI33 GPS2P1-201ENST00000411761 986 ntBASIC6.42□□□□□ -1.38
SCN11AQ9UI33 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
SCN11AQ9UI33 AF186996.5-201ENST00000418098 904 ntBASIC6.42□□□□□ -1.38
SCN11AQ9UI33 AL645608.4-201ENST00000423619 154 ntBASIC6.42□□□□□ -1.38
SCN11AQ9UI33 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC6.42□□□□□ -1.38
SCN11AQ9UI33 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC6.42□□□□□ -1.38
SCN11AQ9UI33 AC104971.1-201ENST00000495117 578 ntBASIC6.42□□□□□ -1.38
SCN11AQ9UI33 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
SCN11AQ9UI33 AC093720.1-201ENST00000505681 714 ntBASIC6.42□□□□□ -1.38
SCN11AQ9UI33 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms