Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 PCNPP2-201ENST00000441651 455 ntBASIC4.91□□□□□ -1.62
VPS29Q9UBQ0 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.91□□□□□ -1.62
VPS29Q9UBQ0 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.91□□□□□ -1.62
VPS29Q9UBQ0 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
VPS29Q9UBQ0 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC4.91□□□□□ -1.62
VPS29Q9UBQ0 RN7SL443P-201ENST00000464331 290 ntBASIC4.91□□□□□ -1.62
VPS29Q9UBQ0 AC104109.1-201ENST00000498563 436 ntBASIC4.91□□□□□ -1.62
VPS29Q9UBQ0 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.91□□□□□ -1.62
VPS29Q9UBQ0 PGAM1P13-201ENST00000507497 754 ntBASIC4.91□□□□□ -1.62
VPS29Q9UBQ0 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.91□□□□□ -1.62
VPS29Q9UBQ0 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.91□□□□□ -1.62
VPS29Q9UBQ0 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.91□□□□□ -1.62
VPS29Q9UBQ0 AC127381.1-201ENST00000555979 939 ntBASIC4.91□□□□□ -1.62
VPS29Q9UBQ0 NDUFB4P11-201ENST00000560510 395 ntBASIC4.91□□□□□ -1.62
VPS29Q9UBQ0 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.91□□□□□ -1.62
VPS29Q9UBQ0 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC4.91□□□□□ -1.62
VPS29Q9UBQ0 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC4.91□□□□□ -1.62
VPS29Q9UBQ0 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.91□□□□□ -1.62
VPS29Q9UBQ0 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.91□□□□□ -1.62
VPS29Q9UBQ0 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.91□□□□□ -1.62
VPS29Q9UBQ0 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.91□□□□□ -1.62
VPS29Q9UBQ0 AL049767.1-202ENST00000637826 242 ntBASIC4.91□□□□□ -1.62
VPS29Q9UBQ0 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
VPS29Q9UBQ0 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.91□□□□□ -1.62
VPS29Q9UBQ0 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
VPS29Q9UBQ0 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
VPS29Q9UBQ0 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC4.9□□□□□ -1.62
VPS29Q9UBQ0 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
VPS29Q9UBQ0 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
VPS29Q9UBQ0 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.62
VPS29Q9UBQ0 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
VPS29Q9UBQ0 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
VPS29Q9UBQ0 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.9□□□□□ -1.62
VPS29Q9UBQ0 SMG1P4-204ENST00000523028 4131 ntBASIC4.9□□□□□ -1.62
VPS29Q9UBQ0 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.9□□□□□ -1.62
VPS29Q9UBQ0 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
VPS29Q9UBQ0 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
VPS29Q9UBQ0 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
VPS29Q9UBQ0 RN7SKP160-201ENST00000363804 340 ntBASIC4.9□□□□□ -1.63
VPS29Q9UBQ0 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.9□□□□□ -1.63
VPS29Q9UBQ0 SNORA2.3-201ENST00000383920 135 ntBASIC4.9□□□□□ -1.63
VPS29Q9UBQ0 GNG5P5-201ENST00000420444 220 ntBASIC4.9□□□□□ -1.63
VPS29Q9UBQ0 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC4.9□□□□□ -1.63
VPS29Q9UBQ0 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.9□□□□□ -1.63
VPS29Q9UBQ0 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.9□□□□□ -1.63
VPS29Q9UBQ0 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.9□□□□□ -1.63
VPS29Q9UBQ0 AC135999.1-201ENST00000478962 479 ntBASIC4.9□□□□□ -1.63
VPS29Q9UBQ0 RN7SL441P-201ENST00000492388 296 ntBASIC4.9□□□□□ -1.63
VPS29Q9UBQ0 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC4.9□□□□□ -1.63
VPS29Q9UBQ0 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
VPS29Q9UBQ0 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.9□□□□□ -1.63
VPS29Q9UBQ0 AC105031.1-201ENST00000518550 476 ntBASIC4.9□□□□□ -1.63
VPS29Q9UBQ0 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.9□□□□□ -1.63
VPS29Q9UBQ0 AC024940.3-201ENST00000538551 316 ntBASIC4.9□□□□□ -1.63
VPS29Q9UBQ0 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.9□□□□□ -1.63
VPS29Q9UBQ0 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.9□□□□□ -1.63
VPS29Q9UBQ0 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.9□□□□□ -1.63
VPS29Q9UBQ0 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.9□□□□□ -1.63
VPS29Q9UBQ0 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.9□□□□□ -1.63
VPS29Q9UBQ0 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.9□□□□□ -1.63
VPS29Q9UBQ0 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
VPS29Q9UBQ0 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
VPS29Q9UBQ0 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.9□□□□□ -1.63
VPS29Q9UBQ0 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
VPS29Q9UBQ0 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
VPS29Q9UBQ0 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
VPS29Q9UBQ0 AC011493.1-201ENST00000596753 1632 ntBASIC4.9□□□□□ -1.63
VPS29Q9UBQ0 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
VPS29Q9UBQ0 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
VPS29Q9UBQ0 CDY11P-201ENST00000447168 1651 ntBASIC4.89□□□□□ -1.63
VPS29Q9UBQ0 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VPS29Q9UBQ0 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.89□□□□□ -1.63
VPS29Q9UBQ0 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VPS29Q9UBQ0 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VPS29Q9UBQ0 AL603750.1-201ENST00000624216 1717 ntBASIC4.89□□□□□ -1.63
VPS29Q9UBQ0 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
VPS29Q9UBQ0 AC100778.3-201ENST00000580060 1750 ntBASIC4.89□□□□□ -1.63
VPS29Q9UBQ0 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
VPS29Q9UBQ0 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
VPS29Q9UBQ0 HSPA8P14-201ENST00000552265 1805 ntBASIC4.89□□□□□ -1.63
VPS29Q9UBQ0 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC4.89□□□□□ -1.63
VPS29Q9UBQ0 AC013429.2-201ENST00000418798 781 ntBASIC4.89□□□□□ -1.63
VPS29Q9UBQ0 SLC35E1P1-201ENST00000419313 864 ntBASIC4.89□□□□□ -1.63
VPS29Q9UBQ0 CFL1P1-202ENST00000432948 411 ntBASIC4.89□□□□□ -1.63
VPS29Q9UBQ0 RPL35AP21-201ENST00000437667 333 ntBASIC4.89□□□□□ -1.63
VPS29Q9UBQ0 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.89□□□□□ -1.63
VPS29Q9UBQ0 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.89□□□□□ -1.63
VPS29Q9UBQ0 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.89□□□□□ -1.63
VPS29Q9UBQ0 MRPL35P2-201ENST00000448009 511 ntBASIC4.89□□□□□ -1.63
VPS29Q9UBQ0 NPM1P19-201ENST00000450070 712 ntBASIC4.89□□□□□ -1.63
VPS29Q9UBQ0 OR2AO1P-201ENST00000476497 403 ntBASIC4.89□□□□□ -1.63
VPS29Q9UBQ0 RPS21P4-201ENST00000487122 248 ntBASIC4.89□□□□□ -1.63
VPS29Q9UBQ0 USP9YP2-201ENST00000504503 1000 ntBASIC4.89□□□□□ -1.63
VPS29Q9UBQ0 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC4.89□□□□□ -1.63
VPS29Q9UBQ0 USP9YP1-201ENST00000513521 1002 ntBASIC4.89□□□□□ -1.63
VPS29Q9UBQ0 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.89□□□□□ -1.63
VPS29Q9UBQ0 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC4.89□□□□□ -1.63
VPS29Q9UBQ0 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.89□□□□□ -1.63
VPS29Q9UBQ0 AC011840.5-201ENST00000582125 771 ntBASIC4.89□□□□□ -1.63
VPS29Q9UBQ0 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms