Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.94□□□□□ -1.46
DKK3Q9UBP4 AC093014.1-201ENST00000548926 724 ntBASIC5.94□□□□□ -1.46
DKK3Q9UBP4 AC079600.1-201ENST00000550326 297 ntBASIC5.94□□□□□ -1.46
DKK3Q9UBP4 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.94□□□□□ -1.46
DKK3Q9UBP4 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.94□□□□□ -1.46
DKK3Q9UBP4 GLRXP2-201ENST00000555594 321 ntBASIC5.94□□□□□ -1.46
DKK3Q9UBP4 AC091078.2-201ENST00000557145 559 ntBASIC5.94□□□□□ -1.46
DKK3Q9UBP4 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC5.94□□□□□ -1.46
DKK3Q9UBP4 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.94□□□□□ -1.46
DKK3Q9UBP4 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.94□□□□□ -1.46
DKK3Q9UBP4 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
DKK3Q9UBP4 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC5.94□□□□□ -1.46
DKK3Q9UBP4 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.94□□□□□ -1.46
DKK3Q9UBP4 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
DKK3Q9UBP4 Z99289.3-201ENST00000605586 594 ntBASIC5.94□□□□□ -1.46
DKK3Q9UBP4 AP005229.2-201ENST00000609980 697 ntBASIC5.94□□□□□ -1.46
DKK3Q9UBP4 AC124016.2-201ENST00000610058 665 ntBASIC5.94□□□□□ -1.46
DKK3Q9UBP4 RNU6-1192P-201ENST00000612197 107 ntBASIC5.94□□□□□ -1.46
DKK3Q9UBP4 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
DKK3Q9UBP4 RNU6-489P-201ENST00000618289 107 ntBASIC5.94□□□□□ -1.46
DKK3Q9UBP4 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.94□□□□□ -1.46
DKK3Q9UBP4 OR8G3P-202ENST00000641572 1255 ntBASIC5.94□□□□□ -1.46
DKK3Q9UBP4 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
DKK3Q9UBP4 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.94□□□□□ -1.46
DKK3Q9UBP4 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
DKK3Q9UBP4 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
DKK3Q9UBP4 AC109446.4-201ENST00000623235 2755 ntBASIC5.94□□□□□ -1.46
DKK3Q9UBP4 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
DKK3Q9UBP4 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
DKK3Q9UBP4 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
DKK3Q9UBP4 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
DKK3Q9UBP4 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.93□□□□□ -1.46
DKK3Q9UBP4 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
DKK3Q9UBP4 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
DKK3Q9UBP4 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
DKK3Q9UBP4 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC5.93□□□□□ -1.46
DKK3Q9UBP4 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
DKK3Q9UBP4 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.93□□□□□ -1.46
DKK3Q9UBP4 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
DKK3Q9UBP4 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
DKK3Q9UBP4 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
DKK3Q9UBP4 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
DKK3Q9UBP4 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
DKK3Q9UBP4 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
DKK3Q9UBP4 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
DKK3Q9UBP4 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
DKK3Q9UBP4 AL031985.1-201ENST00000392713 418 ntBASIC5.93□□□□□ -1.46
DKK3Q9UBP4 AC079355.1-201ENST00000421770 223 ntBASIC5.93□□□□□ -1.46
DKK3Q9UBP4 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.93□□□□□ -1.46
DKK3Q9UBP4 BX323845.3-201ENST00000428215 527 ntBASIC5.93□□□□□ -1.46
DKK3Q9UBP4 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.93□□□□□ -1.46
DKK3Q9UBP4 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.93□□□□□ -1.46
DKK3Q9UBP4 RPS12P17-201ENST00000438591 377 ntBASIC5.93□□□□□ -1.46
DKK3Q9UBP4 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.93□□□□□ -1.46
DKK3Q9UBP4 AC073109.1-201ENST00000445066 978 ntBASIC5.93□□□□□ -1.46
DKK3Q9UBP4 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.93□□□□□ -1.46
DKK3Q9UBP4 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC5.93□□□□□ -1.46
DKK3Q9UBP4 AL445665.1-202ENST00000452436 324 ntBASIC5.93□□□□□ -1.46
DKK3Q9UBP4 RSU1P1-201ENST00000453416 441 ntBASIC5.93□□□□□ -1.46
DKK3Q9UBP4 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.93□□□□□ -1.46
DKK3Q9UBP4 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.93□□□□□ -1.46
DKK3Q9UBP4 SNORD11.1-201ENST00000459482 85 ntBASIC5.93□□□□□ -1.46
DKK3Q9UBP4 AC026348.1-201ENST00000462549 1053 ntBASIC5.93□□□□□ -1.46
DKK3Q9UBP4 AC007998.1-201ENST00000474156 672 ntBASIC5.93□□□□□ -1.46
DKK3Q9UBP4 PFN1P6-201ENST00000476786 399 ntBASIC5.93□□□□□ -1.46
DKK3Q9UBP4 AC005412.2-201ENST00000492004 341 ntBASIC5.93□□□□□ -1.46
DKK3Q9UBP4 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
DKK3Q9UBP4 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC5.93□□□□□ -1.46
DKK3Q9UBP4 PSMA2P2-201ENST00000504319 686 ntBASIC5.93□□□□□ -1.46
DKK3Q9UBP4 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.93□□□□□ -1.46
DKK3Q9UBP4 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.93□□□□□ -1.46
DKK3Q9UBP4 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC5.93□□□□□ -1.46
DKK3Q9UBP4 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.93□□□□□ -1.46
DKK3Q9UBP4 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.93□□□□□ -1.46
DKK3Q9UBP4 HMGN2P36-201ENST00000529541 409 ntBASIC5.93□□□□□ -1.46
DKK3Q9UBP4 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.93□□□□□ -1.46
DKK3Q9UBP4 OR8K4P-201ENST00000534608 872 ntBASIC5.93□□□□□ -1.46
DKK3Q9UBP4 AC087894.1-201ENST00000538359 518 ntBASIC5.93□□□□□ -1.46
DKK3Q9UBP4 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.93□□□□□ -1.46
DKK3Q9UBP4 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC5.93□□□□□ -1.46
DKK3Q9UBP4 EIF1P5-201ENST00000585002 234 ntBASIC5.93□□□□□ -1.46
DKK3Q9UBP4 AP001357.1-201ENST00000586304 1053 ntBASIC5.93□□□□□ -1.46
DKK3Q9UBP4 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
DKK3Q9UBP4 MIR6826-201ENST00000617808 98 ntBASIC5.93□□□□□ -1.46
DKK3Q9UBP4 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.93□□□□□ -1.46
DKK3Q9UBP4 AC245100.2-201ENST00000454544 1679 ntBASIC5.93□□□□□ -1.46
DKK3Q9UBP4 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
DKK3Q9UBP4 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
DKK3Q9UBP4 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.93□□□□□ -1.46
DKK3Q9UBP4 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
DKK3Q9UBP4 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.93□□□□□ -1.46
DKK3Q9UBP4 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
DKK3Q9UBP4 AC130304.1-201ENST00000622942 2385 ntBASIC5.93□□□□□ -1.46
DKK3Q9UBP4 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.93□□□□□ -1.46
DKK3Q9UBP4 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
DKK3Q9UBP4 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
DKK3Q9UBP4 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
DKK3Q9UBP4 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.92□□□□□ -1.46
DKK3Q9UBP4 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
DKK3Q9UBP4 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms