Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HMG20AQ9NP66 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HMG20AQ9NP66 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HMG20AQ9NP66 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
HMG20AQ9NP66 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
HMG20AQ9NP66 CASC19-204ENST00000641001 2055 ntBASIC4.71□□□□□ -1.66
HMG20AQ9NP66 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.71□□□□□ -1.66
HMG20AQ9NP66 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
HMG20AQ9NP66 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC4.71□□□□□ -1.66
HMG20AQ9NP66 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.71□□□□□ -1.66
HMG20AQ9NP66 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HMG20AQ9NP66 AC023421.1-201ENST00000590535 1785 ntBASIC4.7□□□□□ -1.66
HMG20AQ9NP66 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
HMG20AQ9NP66 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMG20AQ9NP66 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMG20AQ9NP66 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.7□□□□□ -1.66
HMG20AQ9NP66 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HMG20AQ9NP66 LINC01109-201ENST00000603837 3081 ntBASIC4.7□□□□□ -1.66
HMG20AQ9NP66 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HMG20AQ9NP66 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
HMG20AQ9NP66 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMG20AQ9NP66 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMG20AQ9NP66 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.7□□□□□ -1.66
HMG20AQ9NP66 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
HMG20AQ9NP66 OR7E25P-201ENST00000344844 931 ntBASIC4.7□□□□□ -1.66
HMG20AQ9NP66 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HMG20AQ9NP66 RNA5SP146-201ENST00000410743 123 ntBASIC4.7□□□□□ -1.66
HMG20AQ9NP66 RN7SKP247-201ENST00000411094 308 ntBASIC4.7□□□□□ -1.66
HMG20AQ9NP66 RMRPP5-201ENST00000411156 267 ntBASIC4.7□□□□□ -1.66
HMG20AQ9NP66 RNU2-18P-201ENST00000411224 162 ntBASIC4.7□□□□□ -1.66
HMG20AQ9NP66 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC4.7□□□□□ -1.66
HMG20AQ9NP66 ATP5A1P8-201ENST00000423669 1291 ntBASIC4.7□□□□□ -1.66
HMG20AQ9NP66 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.7□□□□□ -1.66
HMG20AQ9NP66 AL591623.2-201ENST00000449978 222 ntBASIC4.7□□□□□ -1.66
HMG20AQ9NP66 HLA-DPA3-207ENST00000454398 229 ntBASIC4.7□□□□□ -1.66
HMG20AQ9NP66 AC011476.1-201ENST00000466725 307 ntBASIC4.7□□□□□ -1.66
HMG20AQ9NP66 OARD1-211ENST00000480585 829 ntTSL 3 BASIC4.7□□□□□ -1.66
HMG20AQ9NP66 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.7□□□□□ -1.66
HMG20AQ9NP66 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.7□□□□□ -1.66
HMG20AQ9NP66 AC008250.1-201ENST00000539874 522 ntTSL 3 BASIC4.7□□□□□ -1.66
HMG20AQ9NP66 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC4.7□□□□□ -1.66
HMG20AQ9NP66 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HMG20AQ9NP66 IGBP1P1-201ENST00000554337 1009 ntBASIC4.7□□□□□ -1.66
HMG20AQ9NP66 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.7□□□□□ -1.66
HMG20AQ9NP66 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.7□□□□□ -1.66
HMG20AQ9NP66 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.7□□□□□ -1.66
HMG20AQ9NP66 AC009027.1-201ENST00000604510 479 ntBASIC4.7□□□□□ -1.66
HMG20AQ9NP66 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.7□□□□□ -1.66
HMG20AQ9NP66 uc_338.18-201ENST00000615451 175 ntBASIC4.7□□□□□ -1.66
HMG20AQ9NP66 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.7□□□□□ -1.66
HMG20AQ9NP66 AC129915.3-201ENST00000634128 948 ntBASIC4.7□□□□□ -1.66
HMG20AQ9NP66 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.7□□□□□ -1.66
HMG20AQ9NP66 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HMG20AQ9NP66 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HMG20AQ9NP66 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.7□□□□□ -1.66
HMG20AQ9NP66 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HMG20AQ9NP66 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMG20AQ9NP66 MRE11P1-201ENST00000464884 2127 ntBASIC4.7□□□□□ -1.66
HMG20AQ9NP66 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
HMG20AQ9NP66 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
HMG20AQ9NP66 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
HMG20AQ9NP66 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMG20AQ9NP66 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMG20AQ9NP66 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
HMG20AQ9NP66 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
HMG20AQ9NP66 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HMG20AQ9NP66 LINC01963-201ENST00000562038 3148 ntBASIC4.69□□□□□ -1.66
HMG20AQ9NP66 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.69□□□□□ -1.66
HMG20AQ9NP66 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.69□□□□□ -1.66
HMG20AQ9NP66 RNA5SP131-201ENST00000365452 119 ntBASIC4.69□□□□□ -1.66
HMG20AQ9NP66 VDAC2P1-201ENST00000399358 958 ntBASIC4.69□□□□□ -1.66
HMG20AQ9NP66 HMGB1P20-201ENST00000402555 677 ntBASIC4.69□□□□□ -1.66
HMG20AQ9NP66 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.69□□□□□ -1.66
HMG20AQ9NP66 CDY8P-201ENST00000428380 1279 ntBASIC4.69□□□□□ -1.66
HMG20AQ9NP66 CDY20P-201ENST00000447528 1279 ntBASIC4.69□□□□□ -1.66
HMG20AQ9NP66 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.69□□□□□ -1.66
HMG20AQ9NP66 DNAJB5P1-201ENST00000454004 806 ntBASIC4.69□□□□□ -1.66
HMG20AQ9NP66 RPL7P41-201ENST00000485823 957 ntBASIC4.69□□□□□ -1.66
HMG20AQ9NP66 RPEP1-201ENST00000504507 658 ntBASIC4.69□□□□□ -1.66
HMG20AQ9NP66 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC4.69□□□□□ -1.66
HMG20AQ9NP66 RNU6-615P-201ENST00000516065 106 ntBASIC4.69□□□□□ -1.66
HMG20AQ9NP66 RNA5SP360-201ENST00000516555 118 ntBASIC4.69□□□□□ -1.66
HMG20AQ9NP66 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC4.69□□□□□ -1.66
HMG20AQ9NP66 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.69□□□□□ -1.66
HMG20AQ9NP66 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.69□□□□□ -1.66
HMG20AQ9NP66 MINCR-206ENST00000524335 499 ntTSL 2 BASIC4.69□□□□□ -1.66
HMG20AQ9NP66 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC4.69□□□□□ -1.66
HMG20AQ9NP66 AC107958.1-201ENST00000556576 290 ntBASIC4.69□□□□□ -1.66
HMG20AQ9NP66 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
HMG20AQ9NP66 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC4.69□□□□□ -1.66
HMG20AQ9NP66 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC4.69□□□□□ -1.66
HMG20AQ9NP66 AP001496.3-201ENST00000580230 913 ntBASIC4.69□□□□□ -1.66
HMG20AQ9NP66 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC4.69□□□□□ -1.66
HMG20AQ9NP66 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC4.69□□□□□ -1.66
HMG20AQ9NP66 AL138895.2-201ENST00000603019 178 ntBASIC4.69□□□□□ -1.66
HMG20AQ9NP66 AC108865.2-201ENST00000606881 432 ntBASIC4.69□□□□□ -1.66
HMG20AQ9NP66 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
HMG20AQ9NP66 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMG20AQ9NP66 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
HMG20AQ9NP66 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms