Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
RPAP1Q9BWH6 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
RPAP1Q9BWH6 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RPAP1Q9BWH6 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
RPAP1Q9BWH6 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RPAP1Q9BWH6 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
RPAP1Q9BWH6 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC6.35□□□□□ -1.39
RPAP1Q9BWH6 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.35□□□□□ -1.39
RPAP1Q9BWH6 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC6.34□□□□□ -1.39
RPAP1Q9BWH6 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.34□□□□□ -1.39
RPAP1Q9BWH6 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.34□□□□□ -1.39
RPAP1Q9BWH6 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RPAP1Q9BWH6 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RPAP1Q9BWH6 NUDT19P3-201ENST00000404698 555 ntBASIC6.34□□□□□ -1.39
RPAP1Q9BWH6 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.34□□□□□ -1.39
RPAP1Q9BWH6 EI24P4-201ENST00000423683 1078 ntBASIC6.34□□□□□ -1.39
RPAP1Q9BWH6 RPS3AP41-201ENST00000462701 778 ntBASIC6.34□□□□□ -1.39
RPAP1Q9BWH6 AC083982.1-201ENST00000485679 344 ntBASIC6.34□□□□□ -1.39
RPAP1Q9BWH6 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC6.34□□□□□ -1.39
RPAP1Q9BWH6 AC098976.1-201ENST00000513014 541 ntBASIC6.34□□□□□ -1.39
RPAP1Q9BWH6 UBE2Q2P10-201ENST00000514854 900 ntBASIC6.34□□□□□ -1.39
RPAP1Q9BWH6 RN7SKP147-201ENST00000517154 244 ntBASIC6.34□□□□□ -1.39
RPAP1Q9BWH6 AC134349.2-201ENST00000535136 910 ntBASIC6.34□□□□□ -1.39
RPAP1Q9BWH6 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC6.34□□□□□ -1.39
RPAP1Q9BWH6 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC6.34□□□□□ -1.39
RPAP1Q9BWH6 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC6.34□□□□□ -1.39
RPAP1Q9BWH6 AC100827.5-201ENST00000615883 426 ntBASIC6.34□□□□□ -1.39
RPAP1Q9BWH6 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC6.34□□□□□ -1.39
RPAP1Q9BWH6 AC091953.3-201ENST00000623220 236 ntBASIC6.34□□□□□ -1.39
RPAP1Q9BWH6 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
RPAP1Q9BWH6 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
RPAP1Q9BWH6 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.34□□□□□ -1.39
RPAP1Q9BWH6 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RPAP1Q9BWH6 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
RPAP1Q9BWH6 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
RPAP1Q9BWH6 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
RPAP1Q9BWH6 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
RPAP1Q9BWH6 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
RPAP1Q9BWH6 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RPAP1Q9BWH6 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
RPAP1Q9BWH6 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RPAP1Q9BWH6 NAP1L4P1-201ENST00000319092 1157 ntBASIC6.33□□□□□ -1.4
RPAP1Q9BWH6 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RPAP1Q9BWH6 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.33□□□□□ -1.4
RPAP1Q9BWH6 HSPA8P15-201ENST00000401676 786 ntBASIC6.33□□□□□ -1.4
RPAP1Q9BWH6 AL078599.1-201ENST00000402075 293 ntBASIC6.33□□□□□ -1.4
RPAP1Q9BWH6 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC6.33□□□□□ -1.4
RPAP1Q9BWH6 AC092647.3-201ENST00000443044 633 ntBASIC6.33□□□□□ -1.4
RPAP1Q9BWH6 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RPAP1Q9BWH6 AC022133.1-201ENST00000490961 571 ntBASIC6.33□□□□□ -1.4
RPAP1Q9BWH6 RN7SL591P-201ENST00000496150 292 ntBASIC6.33□□□□□ -1.4
RPAP1Q9BWH6 AC004980.4-201ENST00000513375 203 ntBASIC6.33□□□□□ -1.4
RPAP1Q9BWH6 PCNPP1-201ENST00000552501 511 ntBASIC6.33□□□□□ -1.4
RPAP1Q9BWH6 WDR61-205ENST00000558459 884 ntTSL 3 BASIC6.33□□□□□ -1.4
RPAP1Q9BWH6 AC016839.1-201ENST00000578162 867 ntBASIC6.33□□□□□ -1.4
RPAP1Q9BWH6 AC023389.2-201ENST00000580031 955 ntBASIC6.33□□□□□ -1.4
RPAP1Q9BWH6 AC010503.3-201ENST00000594355 540 ntBASIC6.33□□□□□ -1.4
RPAP1Q9BWH6 AC099494.2-201ENST00000623371 978 ntBASIC6.33□□□□□ -1.4
RPAP1Q9BWH6 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
RPAP1Q9BWH6 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RPAP1Q9BWH6 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RPAP1Q9BWH6 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RPAP1Q9BWH6 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
RPAP1Q9BWH6 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.33□□□□□ -1.4
RPAP1Q9BWH6 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RPAP1Q9BWH6 LIN7C-201ENST00000278193 4688 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RPAP1Q9BWH6 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
RPAP1Q9BWH6 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
RPAP1Q9BWH6 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
RPAP1Q9BWH6 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.33□□□□□ -1.4
RPAP1Q9BWH6 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RPAP1Q9BWH6 DPY19L2P2-203ENST00000435536 1858 ntBASIC6.32□□□□□ -1.4
RPAP1Q9BWH6 RN7SKP103-201ENST00000363848 320 ntBASIC6.32□□□□□ -1.4
RPAP1Q9BWH6 RN7SKP153-201ENST00000365026 316 ntBASIC6.32□□□□□ -1.4
RPAP1Q9BWH6 CHMP1B2P-201ENST00000399581 597 ntBASIC6.32□□□□□ -1.4
RPAP1Q9BWH6 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.32□□□□□ -1.4
RPAP1Q9BWH6 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC6.32□□□□□ -1.4
RPAP1Q9BWH6 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC6.32□□□□□ -1.4
RPAP1Q9BWH6 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC6.32□□□□□ -1.4
RPAP1Q9BWH6 GAPDHP14-201ENST00000450472 937 ntBASIC6.32□□□□□ -1.4
RPAP1Q9BWH6 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC6.32□□□□□ -1.4
RPAP1Q9BWH6 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.32□□□□□ -1.4
RPAP1Q9BWH6 AC009127.1-201ENST00000467090 155 ntBASIC6.32□□□□□ -1.4
RPAP1Q9BWH6 RPL37AP8-201ENST00000494116 276 ntBASIC6.32□□□□□ -1.4
RPAP1Q9BWH6 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC6.32□□□□□ -1.4
RPAP1Q9BWH6 GTF2F2P1-201ENST00000511083 675 ntBASIC6.32□□□□□ -1.4
RPAP1Q9BWH6 IGHVII-44-2-201ENST00000517728 250 ntBASIC6.32□□□□□ -1.4
RPAP1Q9BWH6 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC6.32□□□□□ -1.4
RPAP1Q9BWH6 CR383656.6-201ENST00000550518 394 ntBASIC6.32□□□□□ -1.4
RPAP1Q9BWH6 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC6.32□□□□□ -1.4
RPAP1Q9BWH6 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC6.32□□□□□ -1.4
RPAP1Q9BWH6 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC6.32□□□□□ -1.4
RPAP1Q9BWH6 AC008814.1-201ENST00000603797 406 ntBASIC6.32□□□□□ -1.4
RPAP1Q9BWH6 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RPAP1Q9BWH6 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RPAP1Q9BWH6 INTS6P1-201ENST00000504674 2530 ntBASIC6.32□□□□□ -1.4
RPAP1Q9BWH6 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RPAP1Q9BWH6 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC6.32□□□□□ -1.4
RPAP1Q9BWH6 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
RPAP1Q9BWH6 AC005261.6-201ENST00000623072 1387 ntBASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms