Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC4.25□□□□□ -1.73
VGLL1Q99990 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VGLL1Q99990 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VGLL1Q99990 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.25□□□□□ -1.73
VGLL1Q99990 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
VGLL1Q99990 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VGLL1Q99990 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VGLL1Q99990 AC092681.1-201ENST00000297369 291 ntBASIC4.25□□□□□ -1.73
VGLL1Q99990 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VGLL1Q99990 RNFT1P3-201ENST00000340898 1052 ntBASIC4.25□□□□□ -1.73
VGLL1Q99990 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
VGLL1Q99990 RNU6-697P-201ENST00000363348 107 ntBASIC4.25□□□□□ -1.73
VGLL1Q99990 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VGLL1Q99990 RNA5SP296-201ENST00000410523 111 ntBASIC4.25□□□□□ -1.73
VGLL1Q99990 RN7SKP97-201ENST00000410966 333 ntBASIC4.25□□□□□ -1.73
VGLL1Q99990 RPS3AP25-201ENST00000411660 793 ntBASIC4.25□□□□□ -1.73
VGLL1Q99990 GPS2P1-201ENST00000411761 986 ntBASIC4.25□□□□□ -1.73
VGLL1Q99990 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC4.25□□□□□ -1.73
VGLL1Q99990 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.25□□□□□ -1.73
VGLL1Q99990 MTCO2P23-201ENST00000425216 680 ntBASIC4.25□□□□□ -1.73
VGLL1Q99990 RNF19BPX-201ENST00000426224 625 ntBASIC4.25□□□□□ -1.73
VGLL1Q99990 AC009784.1-201ENST00000426484 460 ntBASIC4.25□□□□□ -1.73
VGLL1Q99990 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC4.25□□□□□ -1.73
VGLL1Q99990 ARL5AP3-201ENST00000439327 386 ntBASIC4.25□□□□□ -1.73
VGLL1Q99990 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC4.25□□□□□ -1.73
VGLL1Q99990 TIMM8BP2-201ENST00000445940 251 ntBASIC4.25□□□□□ -1.73
VGLL1Q99990 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.25□□□□□ -1.73
VGLL1Q99990 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.25□□□□□ -1.73
VGLL1Q99990 AL139824.2-201ENST00000458731 1095 ntBASIC4.25□□□□□ -1.73
VGLL1Q99990 GTPBP8-204ENST00000467752 686 ntTSL 5 BASIC4.25□□□□□ -1.73
VGLL1Q99990 AC068587.2-201ENST00000478386 781 ntBASIC4.25□□□□□ -1.73
VGLL1Q99990 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC4.25□□□□□ -1.73
VGLL1Q99990 AC122718.2-201ENST00000505325 591 ntBASIC4.25□□□□□ -1.73
VGLL1Q99990 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.25□□□□□ -1.73
VGLL1Q99990 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC4.25□□□□□ -1.73
VGLL1Q99990 FABP5P6-201ENST00000510588 409 ntBASIC4.25□□□□□ -1.73
VGLL1Q99990 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.25□□□□□ -1.73
VGLL1Q99990 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.25□□□□□ -1.73
VGLL1Q99990 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VGLL1Q99990 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC4.25□□□□□ -1.73
VGLL1Q99990 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
VGLL1Q99990 AP003396.4-201ENST00000527574 265 ntBASIC4.25□□□□□ -1.73
VGLL1Q99990 AC122688.1-201ENST00000541494 223 ntBASIC4.25□□□□□ -1.73
VGLL1Q99990 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.25□□□□□ -1.73
VGLL1Q99990 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.25□□□□□ -1.73
VGLL1Q99990 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
VGLL1Q99990 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.25□□□□□ -1.73
VGLL1Q99990 RPA2P1-201ENST00000556557 721 ntBASIC4.25□□□□□ -1.73
VGLL1Q99990 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VGLL1Q99990 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC4.25□□□□□ -1.73
VGLL1Q99990 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.25□□□□□ -1.73
VGLL1Q99990 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC4.25□□□□□ -1.73
VGLL1Q99990 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.25□□□□□ -1.73
VGLL1Q99990 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.25□□□□□ -1.73
VGLL1Q99990 APOC2-205ENST00000592257 444 ntTSL 3 BASIC4.25□□□□□ -1.73
VGLL1Q99990 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
VGLL1Q99990 AC004477.3-201ENST00000614061 590 ntBASIC4.25□□□□□ -1.73
VGLL1Q99990 AC244100.4-201ENST00000617747 388 ntBASIC4.25□□□□□ -1.73
VGLL1Q99990 AL645927.2-201ENST00000618350 349 ntBASIC4.25□□□□□ -1.73
VGLL1Q99990 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.25□□□□□ -1.73
VGLL1Q99990 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC4.25□□□□□ -1.73
VGLL1Q99990 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
VGLL1Q99990 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.25□□□□□ -1.73
VGLL1Q99990 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VGLL1Q99990 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VGLL1Q99990 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
VGLL1Q99990 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VGLL1Q99990 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
VGLL1Q99990 AC027088.4-201ENST00000611559 1947 ntBASIC4.25□□□□□ -1.73
VGLL1Q99990 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
VGLL1Q99990 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
VGLL1Q99990 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VGLL1Q99990 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
VGLL1Q99990 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
VGLL1Q99990 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
VGLL1Q99990 RNA5SP232-201ENST00000364144 119 ntBASIC4.24□□□□□ -1.73
VGLL1Q99990 CXADRP1-201ENST00000398098 1095 ntBASIC4.24□□□□□ -1.73
VGLL1Q99990 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC4.24□□□□□ -1.73
VGLL1Q99990 MRPL53P1-201ENST00000414323 319 ntBASIC4.24□□□□□ -1.73
VGLL1Q99990 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC4.24□□□□□ -1.73
VGLL1Q99990 EEF1A1P29-201ENST00000416082 1096 ntBASIC4.24□□□□□ -1.73
VGLL1Q99990 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.24□□□□□ -1.73
VGLL1Q99990 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.24□□□□□ -1.73
VGLL1Q99990 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC4.24□□□□□ -1.73
VGLL1Q99990 HMGB3P5-201ENST00000428894 612 ntBASIC4.24□□□□□ -1.73
VGLL1Q99990 AC126120.1-201ENST00000431082 470 ntBASIC4.24□□□□□ -1.73
VGLL1Q99990 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC4.24□□□□□ -1.73
VGLL1Q99990 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC4.24□□□□□ -1.73
VGLL1Q99990 NDUFB4P8-201ENST00000435351 367 ntBASIC4.24□□□□□ -1.73
VGLL1Q99990 PCBP2P1-201ENST00000437262 977 ntBASIC4.24□□□□□ -1.73
VGLL1Q99990 ATP5LP2-201ENST00000440646 311 ntBASIC4.24□□□□□ -1.73
VGLL1Q99990 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC4.24□□□□□ -1.73
VGLL1Q99990 AL096829.2-201ENST00000446582 742 ntBASIC4.24□□□□□ -1.73
VGLL1Q99990 RPL31P20-201ENST00000449593 360 ntBASIC4.24□□□□□ -1.73
VGLL1Q99990 CFL1P4-201ENST00000451536 498 ntBASIC4.24□□□□□ -1.73
VGLL1Q99990 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.24□□□□□ -1.73
VGLL1Q99990 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.24□□□□□ -1.73
VGLL1Q99990 NXT1P1-201ENST00000458481 316 ntBASIC4.24□□□□□ -1.73
VGLL1Q99990 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC4.24□□□□□ -1.73
VGLL1Q99990 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms