Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC6.24□□□□□ -1.41
CDK5RAP1Q96SZ6 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.24□□□□□ -1.41
CDK5RAP1Q96SZ6 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CDK5RAP1Q96SZ6 AC099677.3-201ENST00000427081 395 ntBASIC6.24□□□□□ -1.41
CDK5RAP1Q96SZ6 RPL34P27-201ENST00000428810 349 ntBASIC6.24□□□□□ -1.41
CDK5RAP1Q96SZ6 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC6.24□□□□□ -1.41
CDK5RAP1Q96SZ6 NAP1L4P3-201ENST00000432820 1147 ntBASIC6.24□□□□□ -1.41
CDK5RAP1Q96SZ6 AL445928.1-201ENST00000435545 222 ntBASIC6.24□□□□□ -1.41
CDK5RAP1Q96SZ6 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC6.24□□□□□ -1.41
CDK5RAP1Q96SZ6 EXTL2P1-201ENST00000446218 416 ntBASIC6.24□□□□□ -1.41
CDK5RAP1Q96SZ6 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.24□□□□□ -1.41
CDK5RAP1Q96SZ6 TRY2P-201ENST00000448860 689 ntBASIC6.24□□□□□ -1.41
CDK5RAP1Q96SZ6 RPL31P53-201ENST00000457065 348 ntBASIC6.24□□□□□ -1.41
CDK5RAP1Q96SZ6 AC124945.1-201ENST00000485133 188 ntBASIC6.24□□□□□ -1.41
CDK5RAP1Q96SZ6 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6.24□□□□□ -1.41
CDK5RAP1Q96SZ6 AC008629.2-201ENST00000503783 483 ntBASIC6.24□□□□□ -1.41
CDK5RAP1Q96SZ6 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC6.24□□□□□ -1.41
CDK5RAP1Q96SZ6 RNA5SP438-201ENST00000516561 112 ntBASIC6.24□□□□□ -1.41
CDK5RAP1Q96SZ6 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
CDK5RAP1Q96SZ6 AP003461.1-201ENST00000528866 78 ntBASIC6.24□□□□□ -1.41
CDK5RAP1Q96SZ6 GCSHP4-201ENST00000538792 439 ntBASIC6.24□□□□□ -1.41
CDK5RAP1Q96SZ6 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.24□□□□□ -1.41
CDK5RAP1Q96SZ6 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC6.24□□□□□ -1.41
CDK5RAP1Q96SZ6 AC079600.1-201ENST00000550326 297 ntBASIC6.24□□□□□ -1.41
CDK5RAP1Q96SZ6 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.24□□□□□ -1.41
CDK5RAP1Q96SZ6 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC6.24□□□□□ -1.41
CDK5RAP1Q96SZ6 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.24□□□□□ -1.41
CDK5RAP1Q96SZ6 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC6.24□□□□□ -1.41
CDK5RAP1Q96SZ6 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC6.24□□□□□ -1.41
CDK5RAP1Q96SZ6 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.24□□□□□ -1.41
CDK5RAP1Q96SZ6 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.24□□□□□ -1.41
CDK5RAP1Q96SZ6 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.24□□□□□ -1.41
CDK5RAP1Q96SZ6 AC009237.12-201ENST00000604755 742 ntBASIC6.24□□□□□ -1.41
CDK5RAP1Q96SZ6 AC004890.3-201ENST00000605566 1095 ntBASIC6.24□□□□□ -1.41
CDK5RAP1Q96SZ6 AP003499.2-201ENST00000624100 483 ntBASIC6.24□□□□□ -1.41
CDK5RAP1Q96SZ6 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
CDK5RAP1Q96SZ6 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC6.24□□□□□ -1.41
CDK5RAP1Q96SZ6 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
CDK5RAP1Q96SZ6 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC6.24□□□□□ -1.41
CDK5RAP1Q96SZ6 AC079753.1-201ENST00000623243 3868 ntBASIC6.24□□□□□ -1.41
CDK5RAP1Q96SZ6 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.24□□□□□ -1.41
CDK5RAP1Q96SZ6 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 AC005225.5-201ENST00000623547 2225 ntBASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 BMS1P3-201ENST00000372011 932 ntBASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 AL096711.1-201ENST00000404780 554 ntBASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 SNORA11.3-201ENST00000408471 128 ntBASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 UBE2V1P10-201ENST00000414685 269 ntBASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 AC017019.1-201ENST00000426129 261 ntBASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 NEK4P1-201ENST00000433383 879 ntBASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 AL590399.4-201ENST00000436561 601 ntBASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 MTATP6P23-201ENST00000440153 476 ntBASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 AC007000.2-201ENST00000442564 487 ntBASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 RPS7P3-201ENST00000443360 580 ntBASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 HLA-DPA3-207ENST00000454398 229 ntBASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 AC099521.1-201ENST00000482557 334 ntBASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 OR5BM1P-201ENST00000512021 366 ntBASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 RN7SKP248-201ENST00000516278 305 ntBASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 MTCO1P49-201ENST00000523429 802 ntBASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 PCNAP4-201ENST00000532690 730 ntBASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 AC024909.2-201ENST00000553035 286 ntBASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 RBM11P1-201ENST00000604951 799 ntBASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 AL353621.2-201ENST00000605340 133 ntBASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 AL021918.2-201ENST00000613415 194 ntBASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 AL139099.4-201ENST00000614802 114 ntBASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 AL031658.2-201ENST00000616850 651 ntBASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 SNORA11.6-201ENST00000619030 128 ntBASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 AL158062.1-201ENST00000619632 745 ntBASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 AC022140.2-201ENST00000623500 188 ntBASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
CDK5RAP1Q96SZ6 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 224.7 ms