Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
IFT140Q96RY7 POLQ-204ENST00000621776 9055 ntTSL 5 BASIC8.34□□□□□ -1.07
IFT140Q96RY7 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
IFT140Q96RY7 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
IFT140Q96RY7 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
IFT140Q96RY7 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
IFT140Q96RY7 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC8.34□□□□□ -1.07
IFT140Q96RY7 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC8.34□□□□□ -1.07
IFT140Q96RY7 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC8.34□□□□□ -1.08
IFT140Q96RY7 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC8.33□□□□□ -1.08
IFT140Q96RY7 AL359837.1-201ENST00000381357 287 ntBASIC8.33□□□□□ -1.08
IFT140Q96RY7 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
IFT140Q96RY7 RAD23BP1-201ENST00000421404 1227 ntBASIC8.33□□□□□ -1.08
IFT140Q96RY7 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC8.33□□□□□ -1.08
IFT140Q96RY7 RNU2-30P-201ENST00000516209 141 ntBASIC8.33□□□□□ -1.08
IFT140Q96RY7 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC8.33□□□□□ -1.08
IFT140Q96RY7 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC8.33□□□□□ -1.08
IFT140Q96RY7 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC8.33□□□□□ -1.08
IFT140Q96RY7 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC8.33□□□□□ -1.08
IFT140Q96RY7 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC8.33□□□□□ -1.08
IFT140Q96RY7 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
IFT140Q96RY7 HSPD1P8-201ENST00000400121 1658 ntBASIC8.33□□□□□ -1.08
IFT140Q96RY7 NRK-204ENST00000540278 1687 ntTSL 2 BASIC8.33□□□□□ -1.08
IFT140Q96RY7 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
IFT140Q96RY7 POMP-202ENST00000460403 1428 ntTSL 3 BASIC8.33□□□□□ -1.08
IFT140Q96RY7 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC8.33□□□□□ -1.08
IFT140Q96RY7 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
IFT140Q96RY7 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
IFT140Q96RY7 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC8.33□□□□□ -1.08
IFT140Q96RY7 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC8.33□□□□□ -1.08
IFT140Q96RY7 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC8.32□□□□□ -1.08
IFT140Q96RY7 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
IFT140Q96RY7 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC8.32□□□□□ -1.08
IFT140Q96RY7 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
IFT140Q96RY7 OR6C69P-201ENST00000394268 893 ntBASIC8.32□□□□□ -1.08
IFT140Q96RY7 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC8.32□□□□□ -1.08
IFT140Q96RY7 MED28P3-201ENST00000444288 531 ntBASIC8.32□□□□□ -1.08
IFT140Q96RY7 AC108751.3-201ENST00000461814 1020 ntBASIC8.32□□□□□ -1.08
IFT140Q96RY7 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC8.32□□□□□ -1.08
IFT140Q96RY7 MIR4429-201ENST00000580105 73 ntBASIC8.32□□□□□ -1.08
IFT140Q96RY7 BNIP3P35-201ENST00000604530 490 ntBASIC8.32□□□□□ -1.08
IFT140Q96RY7 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC8.32□□□□□ -1.08
IFT140Q96RY7 AC034229.5-201ENST00000624258 185 ntBASIC8.32□□□□□ -1.08
IFT140Q96RY7 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
IFT140Q96RY7 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC8.32□□□□□ -1.08
IFT140Q96RY7 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
IFT140Q96RY7 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
IFT140Q96RY7 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
IFT140Q96RY7 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
IFT140Q96RY7 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
IFT140Q96RY7 CTNND1-236ENST00000533667 4990 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
IFT140Q96RY7 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC8.32□□□□□ -1.08
IFT140Q96RY7 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC8.32□□□□□ -1.08
IFT140Q96RY7 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
IFT140Q96RY7 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC8.32□□□□□ -1.08
IFT140Q96RY7 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
IFT140Q96RY7 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
IFT140Q96RY7 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
IFT140Q96RY7 RN7SKP153-201ENST00000365026 316 ntBASIC8.32□□□□□ -1.08
IFT140Q96RY7 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC8.32□□□□□ -1.08
IFT140Q96RY7 SNORA2.3-201ENST00000383920 135 ntBASIC8.32□□□□□ -1.08
IFT140Q96RY7 RPS5P7-201ENST00000456664 608 ntBASIC8.32□□□□□ -1.08
IFT140Q96RY7 MTND2P28-201ENST00000457540 1044 ntBASIC8.32□□□□□ -1.08
IFT140Q96RY7 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC8.32□□□□□ -1.08
IFT140Q96RY7 AC245389.1-201ENST00000605141 529 ntBASIC8.32□□□□□ -1.08
IFT140Q96RY7 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
IFT140Q96RY7 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
IFT140Q96RY7 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
IFT140Q96RY7 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
IFT140Q96RY7 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
IFT140Q96RY7 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC8.31□□□□□ -1.08
IFT140Q96RY7 AC003973.3-201ENST00000624863 2822 ntBASIC8.31□□□□□ -1.08
IFT140Q96RY7 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC8.31□□□□□ -1.08
IFT140Q96RY7 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
IFT140Q96RY7 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC8.31□□□□□ -1.08
IFT140Q96RY7 ATP5A1P4-201ENST00000556888 1605 ntBASIC8.31□□□□□ -1.08
IFT140Q96RY7 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC8.31□□□□□ -1.08
IFT140Q96RY7 RNU1-59P-201ENST00000364829 162 ntBASIC8.31□□□□□ -1.08
IFT140Q96RY7 RNU1-64P-201ENST00000365443 163 ntBASIC8.31□□□□□ -1.08
IFT140Q96RY7 RPL17P50-201ENST00000396131 546 ntBASIC8.31□□□□□ -1.08
IFT140Q96RY7 ST13P16-201ENST00000401760 781 ntBASIC8.31□□□□□ -1.08
IFT140Q96RY7 IGKV1OR9-1-201ENST00000424370 284 ntBASIC8.31□□□□□ -1.08
IFT140Q96RY7 RPL34P27-201ENST00000428810 349 ntBASIC8.31□□□□□ -1.08
IFT140Q96RY7 AC022360.1-201ENST00000521058 340 ntBASIC8.31□□□□□ -1.08
IFT140Q96RY7 U1.25-201ENST00000614085 162 ntBASIC8.31□□□□□ -1.08
IFT140Q96RY7 U1.34-201ENST00000618578 162 ntBASIC8.31□□□□□ -1.08
IFT140Q96RY7 U1.31-201ENST00000620022 160 ntBASIC8.31□□□□□ -1.08
IFT140Q96RY7 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC8.31□□□□□ -1.08
IFT140Q96RY7 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
IFT140Q96RY7 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
IFT140Q96RY7 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
IFT140Q96RY7 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC8.3□□□□□ -1.08
IFT140Q96RY7 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC8.3□□□□□ -1.08
IFT140Q96RY7 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC8.3□□□□□ -1.08
IFT140Q96RY7 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC8.3□□□□□ -1.08
IFT140Q96RY7 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
IFT140Q96RY7 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
IFT140Q96RY7 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC8.3□□□□□ -1.08
IFT140Q96RY7 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC8.3□□□□□ -1.08
IFT140Q96RY7 AL451062.2-201ENST00000427515 271 ntBASIC8.3□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms