Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
CSPG4P5Q96PW8 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
CSPG4P5Q96PW8 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CSPG4P5Q96PW8 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CSPG4P5Q96PW8 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CSPG4P5Q96PW8 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CSPG4P5Q96PW8 DUTP5-201ENST00000406790 469 ntBASIC5.32□□□□□ -1.56
CSPG4P5Q96PW8 MIR1286-201ENST00000408112 78 ntBASIC5.32□□□□□ -1.56
CSPG4P5Q96PW8 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC5.32□□□□□ -1.56
CSPG4P5Q96PW8 MARK2P12-201ENST00000420129 585 ntBASIC5.32□□□□□ -1.56
CSPG4P5Q96PW8 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CSPG4P5Q96PW8 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.32□□□□□ -1.56
CSPG4P5Q96PW8 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CSPG4P5Q96PW8 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.32□□□□□ -1.56
CSPG4P5Q96PW8 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.32□□□□□ -1.56
CSPG4P5Q96PW8 AC245028.2-201ENST00000458673 253 ntBASIC5.32□□□□□ -1.56
CSPG4P5Q96PW8 AC021660.1-201ENST00000465006 554 ntBASIC5.32□□□□□ -1.56
CSPG4P5Q96PW8 AC009127.1-201ENST00000467090 155 ntBASIC5.32□□□□□ -1.56
CSPG4P5Q96PW8 DEFB109A-201ENST00000482450 265 ntBASIC5.32□□□□□ -1.56
CSPG4P5Q96PW8 AC112184.1-201ENST00000505179 312 ntBASIC5.32□□□□□ -1.56
CSPG4P5Q96PW8 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.32□□□□□ -1.56
CSPG4P5Q96PW8 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.32□□□□□ -1.56
CSPG4P5Q96PW8 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC5.32□□□□□ -1.56
CSPG4P5Q96PW8 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.32□□□□□ -1.56
CSPG4P5Q96PW8 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC5.32□□□□□ -1.56
CSPG4P5Q96PW8 RPSAP73-201ENST00000614820 330 ntBASIC5.32□□□□□ -1.56
CSPG4P5Q96PW8 AC008115.4-201ENST00000619780 775 ntBASIC5.32□□□□□ -1.56
CSPG4P5Q96PW8 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.32□□□□□ -1.56
CSPG4P5Q96PW8 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CSPG4P5Q96PW8 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CSPG4P5Q96PW8 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
CSPG4P5Q96PW8 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CSPG4P5Q96PW8 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
CSPG4P5Q96PW8 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CSPG4P5Q96PW8 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.31□□□□□ -1.56
CSPG4P5Q96PW8 OR9K1P-202ENST00000641111 3217 ntBASIC5.31□□□□□ -1.56
CSPG4P5Q96PW8 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
CSPG4P5Q96PW8 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
CSPG4P5Q96PW8 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CSPG4P5Q96PW8 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.31□□□□□ -1.56
CSPG4P5Q96PW8 SNORA17.1-201ENST00000362945 126 ntBASIC5.31□□□□□ -1.56
CSPG4P5Q96PW8 AL035079.1-201ENST00000405210 287 ntBASIC5.31□□□□□ -1.56
CSPG4P5Q96PW8 U3.32-201ENST00000408116 212 ntBASIC5.31□□□□□ -1.56
CSPG4P5Q96PW8 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.31□□□□□ -1.56
CSPG4P5Q96PW8 AL445213.1-201ENST00000412589 747 ntBASIC5.31□□□□□ -1.56
CSPG4P5Q96PW8 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.31□□□□□ -1.56
CSPG4P5Q96PW8 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.31□□□□□ -1.56
CSPG4P5Q96PW8 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC5.31□□□□□ -1.56
CSPG4P5Q96PW8 RNU7-157P-201ENST00000459600 66 ntBASIC5.31□□□□□ -1.56
CSPG4P5Q96PW8 AC005412.2-201ENST00000492004 341 ntBASIC5.31□□□□□ -1.56
CSPG4P5Q96PW8 MORF4L2P1-201ENST00000503761 858 ntBASIC5.31□□□□□ -1.56
CSPG4P5Q96PW8 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.31□□□□□ -1.56
CSPG4P5Q96PW8 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.31□□□□□ -1.56
CSPG4P5Q96PW8 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5.31□□□□□ -1.56
CSPG4P5Q96PW8 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC5.31□□□□□ -1.56
CSPG4P5Q96PW8 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.31□□□□□ -1.56
CSPG4P5Q96PW8 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC5.31□□□□□ -1.56
CSPG4P5Q96PW8 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CSPG4P5Q96PW8 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.31□□□□□ -1.56
CSPG4P5Q96PW8 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.31□□□□□ -1.56
CSPG4P5Q96PW8 AC007066.2-202ENST00000566531 914 ntBASIC5.31□□□□□ -1.56
CSPG4P5Q96PW8 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.31□□□□□ -1.56
CSPG4P5Q96PW8 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.31□□□□□ -1.56
CSPG4P5Q96PW8 MIR4489-201ENST00000578869 62 ntBASIC5.31□□□□□ -1.56
CSPG4P5Q96PW8 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC5.31□□□□□ -1.56
CSPG4P5Q96PW8 AC095055.1-201ENST00000603472 1113 ntBASIC5.31□□□□□ -1.56
CSPG4P5Q96PW8 AC126915.2-201ENST00000610957 190 ntBASIC5.31□□□□□ -1.56
CSPG4P5Q96PW8 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.31□□□□□ -1.56
CSPG4P5Q96PW8 AP002505.2-201ENST00000623585 696 ntBASIC5.31□□□□□ -1.56
CSPG4P5Q96PW8 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.31□□□□□ -1.56
CSPG4P5Q96PW8 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CSPG4P5Q96PW8 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CSPG4P5Q96PW8 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CSPG4P5Q96PW8 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CSPG4P5Q96PW8 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CSPG4P5Q96PW8 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CSPG4P5Q96PW8 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CSPG4P5Q96PW8 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CSPG4P5Q96PW8 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.31□□□□□ -1.56
CSPG4P5Q96PW8 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
CSPG4P5Q96PW8 CASC19-221ENST00000641309 1382 ntBASIC5.3□□□□□ -1.56
CSPG4P5Q96PW8 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CSPG4P5Q96PW8 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.3□□□□□ -1.56
CSPG4P5Q96PW8 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CSPG4P5Q96PW8 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.3□□□□□ -1.56
CSPG4P5Q96PW8 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
CSPG4P5Q96PW8 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
CSPG4P5Q96PW8 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
CSPG4P5Q96PW8 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.3□□□□□ -1.56
CSPG4P5Q96PW8 CBX1P3-201ENST00000413296 527 ntBASIC5.3□□□□□ -1.56
CSPG4P5Q96PW8 NANOGP4-201ENST00000427230 913 ntBASIC5.3□□□□□ -1.56
CSPG4P5Q96PW8 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.3□□□□□ -1.56
CSPG4P5Q96PW8 RPL7AP61-201ENST00000443410 636 ntBASIC5.3□□□□□ -1.56
CSPG4P5Q96PW8 FAR2P1-206ENST00000449736 709 ntBASIC5.3□□□□□ -1.56
CSPG4P5Q96PW8 AL606490.1-201ENST00000452266 765 ntBASIC5.3□□□□□ -1.56
CSPG4P5Q96PW8 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.3□□□□□ -1.56
CSPG4P5Q96PW8 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.3□□□□□ -1.56
CSPG4P5Q96PW8 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
CSPG4P5Q96PW8 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.3□□□□□ -1.56
CSPG4P5Q96PW8 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms