Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
VPS50Q96JG6 BNIP3P32-201ENST00000600015 554 ntBASIC5.74□□□□□ -1.49
VPS50Q96JG6 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.74□□□□□ -1.49
VPS50Q96JG6 AC008555.7-201ENST00000605008 583 ntBASIC5.74□□□□□ -1.49
VPS50Q96JG6 AC021851.1-201ENST00000608537 1082 ntBASIC5.74□□□□□ -1.49
VPS50Q96JG6 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.74□□□□□ -1.49
VPS50Q96JG6 AC068787.1-201ENST00000623908 691 ntBASIC5.74□□□□□ -1.49
VPS50Q96JG6 AL109659.3-201ENST00000624985 950 ntBASIC5.74□□□□□ -1.49
VPS50Q96JG6 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.74□□□□□ -1.49
VPS50Q96JG6 AC073488.3-201ENST00000631611 778 ntBASIC5.74□□□□□ -1.49
VPS50Q96JG6 AC079776.5-201ENST00000641920 211 ntBASIC5.74□□□□□ -1.49
VPS50Q96JG6 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VPS50Q96JG6 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.74□□□□□ -1.49
VPS50Q96JG6 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
VPS50Q96JG6 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VPS50Q96JG6 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.74□□□□□ -1.49
VPS50Q96JG6 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.74□□□□□ -1.49
VPS50Q96JG6 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VPS50Q96JG6 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
VPS50Q96JG6 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VPS50Q96JG6 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
VPS50Q96JG6 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.73□□□□□ -1.49
VPS50Q96JG6 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.73□□□□□ -1.49
VPS50Q96JG6 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
VPS50Q96JG6 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
VPS50Q96JG6 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.73□□□□□ -1.49
VPS50Q96JG6 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VPS50Q96JG6 RBMY1HP-201ENST00000382759 1389 ntBASIC5.73□□□□□ -1.49
VPS50Q96JG6 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VPS50Q96JG6 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VPS50Q96JG6 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
VPS50Q96JG6 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC5.73□□□□□ -1.49
VPS50Q96JG6 RNU6-252P-201ENST00000363232 107 ntBASIC5.73□□□□□ -1.49
VPS50Q96JG6 U3.10-201ENST00000364459 214 ntBASIC5.73□□□□□ -1.49
VPS50Q96JG6 RNA5SP122-201ENST00000384457 108 ntBASIC5.73□□□□□ -1.49
VPS50Q96JG6 MIR130B-202ENST00000385018 82 ntBASIC5.73□□□□□ -1.49
VPS50Q96JG6 MIR323B-201ENST00000385269 82 ntBASIC5.73□□□□□ -1.49
VPS50Q96JG6 SLC20A1P1-201ENST00000413906 956 ntBASIC5.73□□□□□ -1.49
VPS50Q96JG6 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.73□□□□□ -1.49
VPS50Q96JG6 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.73□□□□□ -1.49
VPS50Q96JG6 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC5.73□□□□□ -1.49
VPS50Q96JG6 AC023141.3-201ENST00000436698 278 ntBASIC5.73□□□□□ -1.49
VPS50Q96JG6 MTND2P40-201ENST00000436718 841 ntBASIC5.73□□□□□ -1.49
VPS50Q96JG6 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.73□□□□□ -1.49
VPS50Q96JG6 RPL7P33-201ENST00000444159 742 ntBASIC5.73□□□□□ -1.49
VPS50Q96JG6 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.73□□□□□ -1.49
VPS50Q96JG6 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.73□□□□□ -1.49
VPS50Q96JG6 FTLP8-201ENST00000446770 267 ntBASIC5.73□□□□□ -1.49
VPS50Q96JG6 HMGB1P26-201ENST00000452520 628 ntBASIC5.73□□□□□ -1.49
VPS50Q96JG6 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.73□□□□□ -1.49
VPS50Q96JG6 AC092691.2-201ENST00000461787 803 ntBASIC5.73□□□□□ -1.49
VPS50Q96JG6 EIF1P7-201ENST00000487533 337 ntBASIC5.73□□□□□ -1.49
VPS50Q96JG6 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.73□□□□□ -1.49
VPS50Q96JG6 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.73□□□□□ -1.49
VPS50Q96JG6 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC5.73□□□□□ -1.49
VPS50Q96JG6 RN7SKP34-201ENST00000516142 244 ntBASIC5.73□□□□□ -1.49
VPS50Q96JG6 SNORA19.3-201ENST00000516165 130 ntBASIC5.73□□□□□ -1.49
VPS50Q96JG6 RNA5SP434-201ENST00000516647 121 ntBASIC5.73□□□□□ -1.49
VPS50Q96JG6 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC5.73□□□□□ -1.49
VPS50Q96JG6 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.73□□□□□ -1.49
VPS50Q96JG6 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.73□□□□□ -1.49
VPS50Q96JG6 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.73□□□□□ -1.49
VPS50Q96JG6 AL358913.1-201ENST00000554342 121 ntBASIC5.73□□□□□ -1.49
VPS50Q96JG6 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.73□□□□□ -1.49
VPS50Q96JG6 AC005244.1-201ENST00000582566 339 ntBASIC5.73□□□□□ -1.49
VPS50Q96JG6 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.73□□□□□ -1.49
VPS50Q96JG6 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.73□□□□□ -1.49
VPS50Q96JG6 AP001160.4-201ENST00000596971 382 ntBASIC5.73□□□□□ -1.49
VPS50Q96JG6 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.73□□□□□ -1.49
VPS50Q96JG6 AC074140.1-201ENST00000621617 208 ntBASIC5.73□□□□□ -1.49
VPS50Q96JG6 AL590396.4-201ENST00000636779 956 ntBASIC5.73□□□□□ -1.49
VPS50Q96JG6 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
VPS50Q96JG6 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VPS50Q96JG6 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VPS50Q96JG6 GNL2P1-201ENST00000451274 2190 ntBASIC5.73□□□□□ -1.49
VPS50Q96JG6 AC018717.1-201ENST00000457712 1505 ntBASIC5.73□□□□□ -1.49
VPS50Q96JG6 SMG1P7-201ENST00000565246 2704 ntBASIC5.73□□□□□ -1.49
VPS50Q96JG6 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
VPS50Q96JG6 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.73□□□□□ -1.49
VPS50Q96JG6 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
VPS50Q96JG6 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.73□□□□□ -1.49
VPS50Q96JG6 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VPS50Q96JG6 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VPS50Q96JG6 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VPS50Q96JG6 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VPS50Q96JG6 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
VPS50Q96JG6 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.72□□□□□ -1.49
VPS50Q96JG6 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.72□□□□□ -1.49
VPS50Q96JG6 AL354854.1-201ENST00000455940 1363 ntBASIC5.72□□□□□ -1.49
VPS50Q96JG6 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VPS50Q96JG6 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.72□□□□□ -1.49
VPS50Q96JG6 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VPS50Q96JG6 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
VPS50Q96JG6 RNU6-249P-201ENST00000363016 102 ntBASIC5.72□□□□□ -1.49
VPS50Q96JG6 RNA5SP510-201ENST00000364697 99 ntBASIC5.72□□□□□ -1.49
VPS50Q96JG6 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
VPS50Q96JG6 GAPDHP15-201ENST00000398586 975 ntBASIC5.72□□□□□ -1.49
VPS50Q96JG6 EI24P3-201ENST00000399046 1062 ntBASIC5.72□□□□□ -1.49
VPS50Q96JG6 AL355615.1-201ENST00000406187 641 ntBASIC5.72□□□□□ -1.49
VPS50Q96JG6 SSR1P2-201ENST00000415208 787 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms