Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 AP001029.2-203ENST00000589795 4910 ntBASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 RNU1-150P-201ENST00000362491 162 ntBASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 RNU6-796P-201ENST00000391086 107 ntBASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 SNORA79B-201ENST00000410557 148 ntBASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 OR51B3P-201ENST00000412287 913 ntBASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 MTATP6P20-201ENST00000414147 562 ntBASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 NENFP1-201ENST00000419476 466 ntBASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 MTCO1P43-201ENST00000431831 488 ntBASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 AC007679.3-201ENST00000434035 414 ntBASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 MTCO2P20-201ENST00000437339 673 ntBASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 REG1CP-206ENST00000447469 496 ntBASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 TPT1P1-201ENST00000458495 518 ntBASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 AC096992.1-201ENST00000459808 709 ntBASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 TPT1P3-201ENST00000492841 512 ntBASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 SUMO1P1-201ENST00000497904 306 ntBASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 AC114781.3-201ENST00000512083 142 ntBASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 RNU6-276P-201ENST00000516114 96 ntBASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 LINC00556-201ENST00000569603 412 ntBASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 OOSP1P2-201ENST00000579644 351 ntBASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 CBX3P2-202ENST00000583365 535 ntBASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 COX6CP7-201ENST00000597056 208 ntBASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 AC073137.1-201ENST00000605636 634 ntBASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 AC099785.1-201ENST00000605697 437 ntBASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 AC090607.5-201ENST00000615692 224 ntBASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 AC120349.3-201ENST00000624377 529 ntBASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 CASC19-274ENST00000642018 970 ntBASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 AC007382.1-201ENST00000624376 2618 ntBASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 AL359715.4-201ENST00000606629 1436 ntBASIC5.82□□□□□ -1.48
ATG4AQ8WYN0 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 FGG-205ENST00000407946 1636 ntTSL 5 BASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 RNU5B-4P-201ENST00000363508 111 ntBASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 RNA5SP30-201ENST00000365552 115 ntBASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 RNU6-207P-201ENST00000384137 107 ntBASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 AP002530.1-201ENST00000405705 684 ntBASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 NDUFB4P8-201ENST00000435351 367 ntBASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 ARF4P4-201ENST00000439608 520 ntBASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 MED6P1-201ENST00000439659 713 ntBASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 MTCO1P53-201ENST00000441633 699 ntBASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 CTSLP6-201ENST00000458273 1002 ntBASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 AC010374.1-201ENST00000503762 1237 ntBASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 AC005351.1-201ENST00000511152 786 ntBASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 AC119751.5-201ENST00000514077 770 ntBASIC5.81□□□□□ -1.48
ATG4AQ8WYN0 SNORA19.3-201ENST00000516165 130 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 116.5 ms