Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
SNED1Q8TER0 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.21□□□□□ -1.42
SNED1Q8TER0 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.21□□□□□ -1.42
SNED1Q8TER0 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SNED1Q8TER0 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
SNED1Q8TER0 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
SNED1Q8TER0 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.42
SNED1Q8TER0 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.42
SNED1Q8TER0 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.21□□□□□ -1.42
SNED1Q8TER0 DHX40P1-201ENST00000588725 1412 ntBASIC6.2□□□□□ -1.42
SNED1Q8TER0 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
SNED1Q8TER0 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SNED1Q8TER0 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SNED1Q8TER0 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.2□□□□□ -1.42
SNED1Q8TER0 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SNED1Q8TER0 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SNED1Q8TER0 SNORA70F-201ENST00000384142 135 ntBASIC6.2□□□□□ -1.42
SNED1Q8TER0 OR8V1P-201ENST00000395193 873 ntBASIC6.2□□□□□ -1.42
SNED1Q8TER0 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
SNED1Q8TER0 RSU1P3-201ENST00000412878 835 ntBASIC6.2□□□□□ -1.42
SNED1Q8TER0 BX510359.2-201ENST00000417920 305 ntBASIC6.2□□□□□ -1.42
SNED1Q8TER0 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.2□□□□□ -1.42
SNED1Q8TER0 AC007064.3-201ENST00000422608 359 ntBASIC6.2□□□□□ -1.42
SNED1Q8TER0 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC6.2□□□□□ -1.42
SNED1Q8TER0 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC6.2□□□□□ -1.42
SNED1Q8TER0 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.2□□□□□ -1.42
SNED1Q8TER0 AL356390.1-201ENST00000455684 397 ntBASIC6.2□□□□□ -1.42
SNED1Q8TER0 RPL12P20-201ENST00000475538 479 ntBASIC6.2□□□□□ -1.42
SNED1Q8TER0 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SNED1Q8TER0 IGBP1P4-201ENST00000503202 879 ntBASIC6.2□□□□□ -1.42
SNED1Q8TER0 HMGN1P9-201ENST00000515212 298 ntBASIC6.2□□□□□ -1.42
SNED1Q8TER0 RN7SKP21-201ENST00000516503 220 ntBASIC6.2□□□□□ -1.42
SNED1Q8TER0 AC136777.2-201ENST00000522979 358 ntBASIC6.2□□□□□ -1.42
SNED1Q8TER0 GTF2IP11-201ENST00000526931 420 ntBASIC6.2□□□□□ -1.42
SNED1Q8TER0 AC079064.1-201ENST00000528365 362 ntBASIC6.2□□□□□ -1.42
SNED1Q8TER0 MIR4284-201ENST00000578924 81 ntBASIC6.2□□□□□ -1.42
SNED1Q8TER0 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.2□□□□□ -1.42
SNED1Q8TER0 uc_338.7-201ENST00000621834 124 ntBASIC6.2□□□□□ -1.42
SNED1Q8TER0 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SNED1Q8TER0 SAMMSON-226ENST00000642089 1582 ntBASIC6.2□□□□□ -1.42
SNED1Q8TER0 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SNED1Q8TER0 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SNED1Q8TER0 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SNED1Q8TER0 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
SNED1Q8TER0 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
SNED1Q8TER0 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SNED1Q8TER0 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SNED1Q8TER0 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SNED1Q8TER0 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SNED1Q8TER0 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SNED1Q8TER0 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SNED1Q8TER0 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SNED1Q8TER0 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC6.19□□□□□ -1.42
SNED1Q8TER0 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC6.19□□□□□ -1.42
SNED1Q8TER0 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC6.19□□□□□ -1.42
SNED1Q8TER0 RPL12P43-201ENST00000420608 499 ntBASIC6.19□□□□□ -1.42
SNED1Q8TER0 AC021876.1-201ENST00000425959 359 ntBASIC6.19□□□□□ -1.42
SNED1Q8TER0 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC6.19□□□□□ -1.42
SNED1Q8TER0 AC025674.1-201ENST00000507074 324 ntBASIC6.19□□□□□ -1.42
SNED1Q8TER0 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.19□□□□□ -1.42
SNED1Q8TER0 RN7SKP122-201ENST00000515923 296 ntBASIC6.19□□□□□ -1.42
SNED1Q8TER0 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.19□□□□□ -1.42
SNED1Q8TER0 OR5M2P-201ENST00000529003 936 ntBASIC6.19□□□□□ -1.42
SNED1Q8TER0 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC6.19□□□□□ -1.42
SNED1Q8TER0 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC6.19□□□□□ -1.42
SNED1Q8TER0 AC105129.1-201ENST00000560250 297 ntBASIC6.19□□□□□ -1.42
SNED1Q8TER0 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC6.19□□□□□ -1.42
SNED1Q8TER0 RPL26P30-202ENST00000602923 645 ntBASIC6.19□□□□□ -1.42
SNED1Q8TER0 AC098935.2-201ENST00000604222 466 ntBASIC6.19□□□□□ -1.42
SNED1Q8TER0 AC009704.2-201ENST00000618739 483 ntBASIC6.19□□□□□ -1.42
SNED1Q8TER0 AC021422.1-201ENST00000621212 473 ntBASIC6.19□□□□□ -1.42
SNED1Q8TER0 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC6.19□□□□□ -1.42
SNED1Q8TER0 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SNED1Q8TER0 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SNED1Q8TER0 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC6.19□□□□□ -1.42
SNED1Q8TER0 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
SNED1Q8TER0 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SNED1Q8TER0 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
SNED1Q8TER0 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.19□□□□□ -1.42
SNED1Q8TER0 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SNED1Q8TER0 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.19□□□□□ -1.42
SNED1Q8TER0 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
SNED1Q8TER0 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SNED1Q8TER0 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.19□□□□□ -1.42
SNED1Q8TER0 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.19□□□□□ -1.42
SNED1Q8TER0 TRPM6-204ENST00000449912 8244 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SNED1Q8TER0 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SNED1Q8TER0 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SNED1Q8TER0 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
SNED1Q8TER0 AF186996.5-201ENST00000418098 904 ntBASIC6.18□□□□□ -1.42
SNED1Q8TER0 TRGV5P-201ENST00000419915 354 ntBASIC6.18□□□□□ -1.42
SNED1Q8TER0 CCNB1IP1P2-201ENST00000432876 818 ntBASIC6.18□□□□□ -1.42
SNED1Q8TER0 AL161722.2-201ENST00000434731 981 ntBASIC6.18□□□□□ -1.42
SNED1Q8TER0 CYCSP11-201ENST00000436426 315 ntBASIC6.18□□□□□ -1.42
SNED1Q8TER0 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SNED1Q8TER0 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC6.18□□□□□ -1.42
SNED1Q8TER0 KATNBL1P4-201ENST00000503545 918 ntBASIC6.18□□□□□ -1.42
SNED1Q8TER0 SCARNA22-201ENST00000503991 125 ntBASIC6.18□□□□□ -1.42
SNED1Q8TER0 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.18□□□□□ -1.42
SNED1Q8TER0 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms