Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.85□□□□□ -1.63
C9orf40Q8IXQ3 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
C9orf40Q8IXQ3 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
C9orf40Q8IXQ3 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
C9orf40Q8IXQ3 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
C9orf40Q8IXQ3 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC4.84□□□□□ -1.63
C9orf40Q8IXQ3 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
C9orf40Q8IXQ3 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
C9orf40Q8IXQ3 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
C9orf40Q8IXQ3 AC109780.1-201ENST00000451768 1344 ntBASIC4.84□□□□□ -1.63
C9orf40Q8IXQ3 RPL23P2-201ENST00000320371 421 ntBASIC4.84□□□□□ -1.63
C9orf40Q8IXQ3 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
C9orf40Q8IXQ3 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
C9orf40Q8IXQ3 RNA5SP241-201ENST00000391326 114 ntBASIC4.84□□□□□ -1.63
C9orf40Q8IXQ3 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
C9orf40Q8IXQ3 NUDT19P3-201ENST00000404698 555 ntBASIC4.84□□□□□ -1.63
C9orf40Q8IXQ3 RN7SKP278-201ENST00000410504 342 ntBASIC4.84□□□□□ -1.63
C9orf40Q8IXQ3 RN7SKP126-201ENST00000411143 300 ntBASIC4.84□□□□□ -1.63
C9orf40Q8IXQ3 DPPA2P3-201ENST00000411853 655 ntBASIC4.84□□□□□ -1.63
C9orf40Q8IXQ3 RFESDP1-201ENST00000422350 461 ntBASIC4.84□□□□□ -1.63
C9orf40Q8IXQ3 AC005033.1-201ENST00000428904 813 ntBASIC4.84□□□□□ -1.63
C9orf40Q8IXQ3 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.84□□□□□ -1.63
C9orf40Q8IXQ3 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.84□□□□□ -1.63
C9orf40Q8IXQ3 RPS18P6-201ENST00000476880 458 ntBASIC4.84□□□□□ -1.63
C9orf40Q8IXQ3 TRBV8-1-201ENST00000481590 279 ntBASIC4.84□□□□□ -1.63
C9orf40Q8IXQ3 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.84□□□□□ -1.63
C9orf40Q8IXQ3 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC4.84□□□□□ -1.63
C9orf40Q8IXQ3 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.84□□□□□ -1.63
C9orf40Q8IXQ3 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.84□□□□□ -1.63
C9orf40Q8IXQ3 RNU6-943P-201ENST00000516960 98 ntBASIC4.84□□□□□ -1.63
C9orf40Q8IXQ3 AC092709.1-201ENST00000521355 1045 ntBASIC4.84□□□□□ -1.63
C9orf40Q8IXQ3 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC4.84□□□□□ -1.63
C9orf40Q8IXQ3 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
C9orf40Q8IXQ3 HAUS8P1-201ENST00000549005 542 ntBASIC4.84□□□□□ -1.63
C9orf40Q8IXQ3 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.84□□□□□ -1.63
C9orf40Q8IXQ3 LSM3P2-201ENST00000551246 273 ntBASIC4.84□□□□□ -1.63
C9orf40Q8IXQ3 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.84□□□□□ -1.63
C9orf40Q8IXQ3 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
C9orf40Q8IXQ3 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC4.84□□□□□ -1.63
C9orf40Q8IXQ3 AP005131.7-201ENST00000610087 611 ntBASIC4.84□□□□□ -1.63
C9orf40Q8IXQ3 AC008833.1-201ENST00000611633 691 ntBASIC4.84□□□□□ -1.63
C9orf40Q8IXQ3 MIR6839-201ENST00000620425 113 ntBASIC4.84□□□□□ -1.63
C9orf40Q8IXQ3 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.84□□□□□ -1.63
C9orf40Q8IXQ3 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.84□□□□□ -1.63
C9orf40Q8IXQ3 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
C9orf40Q8IXQ3 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
C9orf40Q8IXQ3 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
C9orf40Q8IXQ3 AP001029.2-203ENST00000589795 4910 ntBASIC4.84□□□□□ -1.63
C9orf40Q8IXQ3 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
C9orf40Q8IXQ3 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
C9orf40Q8IXQ3 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 ZNF733P-202ENST00000444809 1573 ntBASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 PANDAR-201ENST00000629595 1506 ntBASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 AC007342.9-201ENST00000623877 1385 ntBASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 MIR600-201ENST00000385007 98 ntBASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 OR8V1P-201ENST00000395193 873 ntBASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 AC240504.1-201ENST00000395709 845 ntBASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 TANK-203ENST00000402568 878 ntTSL 5 BASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 AL589994.1-201ENST00000404962 340 ntBASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 MIR1182-201ENST00000408363 97 ntBASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 RPS4XP16-201ENST00000427198 791 ntBASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 HSPD1P12-201ENST00000429127 1069 ntBASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 UBE2V2P3-201ENST00000433562 437 ntBASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 AL161722.2-201ENST00000434731 981 ntBASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 RPS29P10-201ENST00000439197 166 ntBASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 CBX1P2-201ENST00000453841 458 ntBASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 RNU6-775P-201ENST00000459318 96 ntBASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 RN7SL189P-201ENST00000468631 289 ntBASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 AC069304.1-201ENST00000491593 704 ntBASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 SNRPCP2-201ENST00000504370 475 ntBASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 AC093763.2-201ENST00000505334 1223 ntBASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 CCNHP1-201ENST00000513311 678 ntBASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 RNU6-513P-201ENST00000516104 104 ntBASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 KCTD9P6-201ENST00000522306 950 ntBASIC4.83□□□□□ -1.64
C9orf40Q8IXQ3 HNRNPRP2-201ENST00000528421 743 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms