Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 LRP2-201ENST00000263816 15808 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
VPS13CQ709C8 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
VPS13CQ709C8 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
VPS13CQ709C8 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
VPS13CQ709C8 AL161909.1-201ENST00000397390 712 ntBASIC4□□□□□ -1.77
VPS13CQ709C8 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4□□□□□ -1.77
VPS13CQ709C8 NUTF2P3-201ENST00000448540 384 ntBASIC4□□□□□ -1.77
VPS13CQ709C8 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
VPS13CQ709C8 RN7SL303P-201ENST00000469773 251 ntBASIC4□□□□□ -1.77
VPS13CQ709C8 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4□□□□□ -1.77
VPS13CQ709C8 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC4□□□□□ -1.77
VPS13CQ709C8 AL133338.2-201ENST00000604292 736 ntBASIC4□□□□□ -1.77
VPS13CQ709C8 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC4□□□□□ -1.77
VPS13CQ709C8 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
VPS13CQ709C8 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
VPS13CQ709C8 ATP5G3-201ENST00000284727 5484 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
VPS13CQ709C8 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VPS13CQ709C8 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC3.99□□□□□ -1.77
VPS13CQ709C8 STK3-216ENST00000523601 3107 ntTSL 2 BASIC3.99□□□□□ -1.77
VPS13CQ709C8 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VPS13CQ709C8 GRIP1-201ENST00000359742 5216 ntTSL 5 BASIC3.99□□□□□ -1.77
VPS13CQ709C8 GABRB3-204ENST00000541819 5934 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VPS13CQ709C8 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
VPS13CQ709C8 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.99□□□□□ -1.77
VPS13CQ709C8 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VPS13CQ709C8 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC3.99□□□□□ -1.77
VPS13CQ709C8 ACTR3P2-201ENST00000439585 1257 ntBASIC3.99□□□□□ -1.77
VPS13CQ709C8 snoU109.5-201ENST00000516231 132 ntBASIC3.99□□□□□ -1.77
VPS13CQ709C8 AC022360.1-201ENST00000521058 340 ntBASIC3.99□□□□□ -1.77
VPS13CQ709C8 AC084824.2-201ENST00000548906 345 ntBASIC3.99□□□□□ -1.77
VPS13CQ709C8 UBA2-208ENST00000592791 910 ntTSL 2 BASIC3.99□□□□□ -1.77
VPS13CQ709C8 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC3.99□□□□□ -1.77
VPS13CQ709C8 AC069542.2-201ENST00000624816 216 ntBASIC3.99□□□□□ -1.77
VPS13CQ709C8 TLK1P1-201ENST00000456760 2440 ntBASIC3.99□□□□□ -1.77
VPS13CQ709C8 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC3.99□□□□□ -1.77
VPS13CQ709C8 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
VPS13CQ709C8 TTC41P-205ENST00000551270 3963 ntBASIC3.99□□□□□ -1.77
VPS13CQ709C8 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
VPS13CQ709C8 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
VPS13CQ709C8 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
VPS13CQ709C8 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
VPS13CQ709C8 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC3.99□□□□□ -1.77
VPS13CQ709C8 RPS24P16-201ENST00000497294 392 ntBASIC3.99□□□□□ -1.77
VPS13CQ709C8 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.99□□□□□ -1.77
VPS13CQ709C8 MAL2-201ENST00000522112 573 ntTSL 4 BASIC3.99□□□□□ -1.77
VPS13CQ709C8 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC3.99□□□□□ -1.77
VPS13CQ709C8 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
VPS13CQ709C8 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
VPS13CQ709C8 ZNF566-204ENST00000434377 5197 ntAPPRIS P3 TSL 2 BASIC3.99□□□□□ -1.77
VPS13CQ709C8 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VPS13CQ709C8 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC3.99□□□□□ -1.77
VPS13CQ709C8 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
VPS13CQ709C8 OR8G2P-201ENST00000412796 908 ntBASIC3.99□□□□□ -1.77
VPS13CQ709C8 AC023424.1-201ENST00000496058 459 ntBASIC3.99□□□□□ -1.77
VPS13CQ709C8 ENPP7P11-201ENST00000505915 627 ntBASIC3.99□□□□□ -1.77
VPS13CQ709C8 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC3.99□□□□□ -1.77
VPS13CQ709C8 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
VPS13CQ709C8 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
VPS13CQ709C8 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.99□□□□□ -1.77
VPS13CQ709C8 AL136359.1-201ENST00000625090 565 ntTSL 2 BASIC3.99□□□□□ -1.77
VPS13CQ709C8 KIF13A-203ENST00000378814 6924 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
VPS13CQ709C8 AC068769.1-201ENST00000474767 2426 ntBASIC3.98□□□□□ -1.77
VPS13CQ709C8 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC3.98□□□□□ -1.77
VPS13CQ709C8 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
VPS13CQ709C8 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC3.98□□□□□ -1.77
VPS13CQ709C8 AL592148.3-201ENST00000608771 2646 ntBASIC3.98□□□□□ -1.77
VPS13CQ709C8 GPRIN3-201ENST00000333209 6260 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
VPS13CQ709C8 TRPM8-204ENST00000433712 5291 ntTSL 5 BASIC3.98□□□□□ -1.77
VPS13CQ709C8 ZDHHC21-201ENST00000380916 9160 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VPS13CQ709C8 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
VPS13CQ709C8 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
VPS13CQ709C8 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC3.98□□□□□ -1.77
VPS13CQ709C8 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
VPS13CQ709C8 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC3.98□□□□□ -1.77
VPS13CQ709C8 AC011626.1-201ENST00000604710 562 ntBASIC3.98□□□□□ -1.77
VPS13CQ709C8 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC3.98□□□□□ -1.77
VPS13CQ709C8 uc_338.7-201ENST00000621834 124 ntBASIC3.98□□□□□ -1.77
VPS13CQ709C8 RNF123-214ENST00000629802 207 ntTSL 5 BASIC3.98□□□□□ -1.77
VPS13CQ709C8 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VPS13CQ709C8 SYNE1-213ENST00000448038 6001 ntTSL 5 BASIC3.98□□□□□ -1.77
VPS13CQ709C8 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
VPS13CQ709C8 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC3.98□□□□□ -1.77
VPS13CQ709C8 CEP152-202ENST00000380950 5635 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
VPS13CQ709C8 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VPS13CQ709C8 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC3.98□□□□□ -1.77
VPS13CQ709C8 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
VPS13CQ709C8 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
VPS13CQ709C8 AL607077.1-201ENST00000401718 499 ntBASIC3.98□□□□□ -1.77
VPS13CQ709C8 RPS29P17-201ENST00000430795 166 ntBASIC3.98□□□□□ -1.77
VPS13CQ709C8 BX323845.1-201ENST00000432417 179 ntBASIC3.98□□□□□ -1.77
VPS13CQ709C8 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.98□□□□□ -1.77
VPS13CQ709C8 AK3P4-201ENST00000504283 583 ntBASIC3.98□□□□□ -1.77
VPS13CQ709C8 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC3.98□□□□□ -1.77
VPS13CQ709C8 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC3.98□□□□□ -1.77
VPS13CQ709C8 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC3.98□□□□□ -1.77
VPS13CQ709C8 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC3.98□□□□□ -1.77
VPS13CQ709C8 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC3.98□□□□□ -1.77
VPS13CQ709C8 MIR6853-201ENST00000619642 74 ntBASIC3.98□□□□□ -1.77
VPS13CQ709C8 LDHA-225ENST00000625635 141 ntTSL 5 BASIC3.98□□□□□ -1.77
VPS13CQ709C8 RNA5SP196-201ENST00000625967 102 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms