Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 RPS12P31-201ENST00000491419 398 ntBASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 AC113420.1-201ENST00000507903 571 ntBASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 IGKV2-19-201ENST00000518132 283 ntBASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 AC083923.1-201ENST00000523708 376 ntBASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 AL358913.1-201ENST00000554342 121 ntBASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 AP005119.1-201ENST00000580956 292 ntBASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 MIR6768-201ENST00000610734 72 ntBASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 AC123767.1-202ENST00000620407 817 ntBASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 AC109454.4-201ENST00000623411 649 ntBASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC7.02□□□□□ -1.29
CCDC144BQ3MJ40 AL355578.1-201ENST00000607405 1328 ntBASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 AL442128.2-201ENST00000620246 1824 ntBASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 AP002530.1-201ENST00000405705 684 ntBASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 RNA5SP178-201ENST00000410380 128 ntBASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 DNAJC19P5-201ENST00000443295 316 ntBASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 AC011476.1-201ENST00000466725 307 ntBASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 RPL7P40-201ENST00000481703 745 ntBASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 RN7SL193P-201ENST00000491708 276 ntBASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 HPRT1P2-201ENST00000505250 544 ntBASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 PRELID3BP4-201ENST00000515476 571 ntBASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 CYP2C60P-201ENST00000566088 139 ntBASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 AC092121.1-201ENST00000569452 202 ntBASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 RBM22P1-201ENST00000578589 1214 ntBASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 AC022884.3-201ENST00000579571 248 ntBASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 NPIPB1P-202ENST00000588786 828 ntBASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 AC002487.1-201ENST00000604565 994 ntBASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 AC126175.1-201ENST00000617041 758 ntBASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 5S_rRNA.28-201ENST00000638107 119 ntBASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 AC068870.3-201ENST00000625077 2536 ntBASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 AC079753.1-201ENST00000623243 3868 ntBASIC7.01□□□□□ -1.29
CCDC144BQ3MJ40 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC7□□□□□ -1.29
CCDC144BQ3MJ40 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC7□□□□□ -1.29
CCDC144BQ3MJ40 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC7□□□□□ -1.29
CCDC144BQ3MJ40 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC7□□□□□ -1.29
CCDC144BQ3MJ40 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
CCDC144BQ3MJ40 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC7□□□□□ -1.29
CCDC144BQ3MJ40 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC7□□□□□ -1.29
CCDC144BQ3MJ40 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms