Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SYCNQ0VAF6 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC3.6□□□□□ -1.83
SYCNQ0VAF6 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
SYCNQ0VAF6 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
SYCNQ0VAF6 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SYCNQ0VAF6 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SYCNQ0VAF6 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SYCNQ0VAF6 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC3.59□□□□□ -1.83
SYCNQ0VAF6 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SYCNQ0VAF6 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SYCNQ0VAF6 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SYCNQ0VAF6 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SYCNQ0VAF6 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC3.59□□□□□ -1.83
SYCNQ0VAF6 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
SYCNQ0VAF6 RNU1-19P-201ENST00000363306 165 ntBASIC3.59□□□□□ -1.83
SYCNQ0VAF6 MIR621-201ENST00000384919 96 ntBASIC3.59□□□□□ -1.83
SYCNQ0VAF6 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
SYCNQ0VAF6 PPIAP9-201ENST00000403866 498 ntBASIC3.59□□□□□ -1.83
SYCNQ0VAF6 AL512504.1-201ENST00000415494 778 ntBASIC3.59□□□□□ -1.83
SYCNQ0VAF6 Z93019.1-201ENST00000416450 973 ntBASIC3.59□□□□□ -1.83
SYCNQ0VAF6 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC3.59□□□□□ -1.83
SYCNQ0VAF6 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC3.59□□□□□ -1.83
SYCNQ0VAF6 RPS3P2-201ENST00000421346 701 ntBASIC3.59□□□□□ -1.83
SYCNQ0VAF6 AL356806.1-201ENST00000422524 916 ntBASIC3.59□□□□□ -1.83
SYCNQ0VAF6 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SYCNQ0VAF6 SETP10-201ENST00000424368 814 ntBASIC3.59□□□□□ -1.83
SYCNQ0VAF6 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
SYCNQ0VAF6 AL662874.1-201ENST00000426065 230 ntBASIC3.59□□□□□ -1.83
SYCNQ0VAF6 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC3.59□□□□□ -1.83
SYCNQ0VAF6 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC3.59□□□□□ -1.83
SYCNQ0VAF6 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SYCNQ0VAF6 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC3.59□□□□□ -1.83
SYCNQ0VAF6 AC090018.1-201ENST00000434369 367 ntBASIC3.59□□□□□ -1.83
SYCNQ0VAF6 OR6D1P-201ENST00000436165 939 ntBASIC3.59□□□□□ -1.83
SYCNQ0VAF6 AL606490.8-201ENST00000441624 319 ntBASIC3.59□□□□□ -1.83
SYCNQ0VAF6 HMGN1P2-201ENST00000445197 310 ntBASIC3.59□□□□□ -1.83
SYCNQ0VAF6 AL157884.3-201ENST00000448273 1184 ntBASIC3.59□□□□□ -1.83
SYCNQ0VAF6 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC3.59□□□□□ -1.83
SYCNQ0VAF6 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.59□□□□□ -1.83
SYCNQ0VAF6 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC3.59□□□□□ -1.83
SYCNQ0VAF6 AC022133.1-201ENST00000490961 571 ntBASIC3.59□□□□□ -1.83
SYCNQ0VAF6 EIF3LP3-201ENST00000495197 822 ntBASIC3.59□□□□□ -1.83
SYCNQ0VAF6 AC021106.1-201ENST00000509020 1058 ntBASIC3.59□□□□□ -1.83
SYCNQ0VAF6 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC3.59□□□□□ -1.83
SYCNQ0VAF6 AC109464.1-201ENST00000511091 819 ntBASIC3.59□□□□□ -1.83
SYCNQ0VAF6 AC021193.1-201ENST00000511607 420 ntBASIC3.59□□□□□ -1.83
SYCNQ0VAF6 MTND6P2-201ENST00000512226 524 ntBASIC3.59□□□□□ -1.83
SYCNQ0VAF6 NRBF2P4-201ENST00000520874 850 ntBASIC3.59□□□□□ -1.83
SYCNQ0VAF6 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC3.59□□□□□ -1.83
SYCNQ0VAF6 IGKV2-4-201ENST00000523070 340 ntBASIC3.59□□□□□ -1.83
SYCNQ0VAF6 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC3.59□□□□□ -1.83
SYCNQ0VAF6 AP004609.2-201ENST00000532177 190 ntBASIC3.59□□□□□ -1.83
SYCNQ0VAF6 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC3.59□□□□□ -1.83
SYCNQ0VAF6 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC3.59□□□□□ -1.83
SYCNQ0VAF6 LSM3P2-201ENST00000551246 273 ntBASIC3.59□□□□□ -1.83
SYCNQ0VAF6 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC3.59□□□□□ -1.83
SYCNQ0VAF6 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC3.59□□□□□ -1.83
SYCNQ0VAF6 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC3.59□□□□□ -1.83
SYCNQ0VAF6 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC3.59□□□□□ -1.83
SYCNQ0VAF6 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC3.59□□□□□ -1.83
SYCNQ0VAF6 AC005726.4-201ENST00000582858 458 ntBASIC3.59□□□□□ -1.83
SYCNQ0VAF6 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC3.59□□□□□ -1.83
SYCNQ0VAF6 GMFG-212ENST00000602185 423 ntTSL 3 BASIC3.59□□□□□ -1.83
SYCNQ0VAF6 XIST-210ENST00000602863 775 ntTSL 3 BASIC3.59□□□□□ -1.83
SYCNQ0VAF6 HMGB1P51-201ENST00000605166 638 ntBASIC3.59□□□□□ -1.83
SYCNQ0VAF6 AC100814.1-201ENST00000606963 623 ntBASIC3.59□□□□□ -1.83
SYCNQ0VAF6 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC3.59□□□□□ -1.83
SYCNQ0VAF6 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC3.59□□□□□ -1.83
SYCNQ0VAF6 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
SYCNQ0VAF6 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.59□□□□□ -1.83
SYCNQ0VAF6 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC3.59□□□□□ -1.83
SYCNQ0VAF6 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SYCNQ0VAF6 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SYCNQ0VAF6 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
SYCNQ0VAF6 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SYCNQ0VAF6 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
SYCNQ0VAF6 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
SYCNQ0VAF6 MTCO1P15-201ENST00000529569 1526 ntBASIC3.59□□□□□ -1.84
SYCNQ0VAF6 RLIMP2-201ENST00000427891 1563 ntBASIC3.59□□□□□ -1.84
SYCNQ0VAF6 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
SYCNQ0VAF6 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.84
SYCNQ0VAF6 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC3.59□□□□□ -1.84
SYCNQ0VAF6 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC3.58□□□□□ -1.84
SYCNQ0VAF6 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC3.58□□□□□ -1.84
SYCNQ0VAF6 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC3.58□□□□□ -1.84
SYCNQ0VAF6 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
SYCNQ0VAF6 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC3.58□□□□□ -1.84
SYCNQ0VAF6 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SYCNQ0VAF6 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
SYCNQ0VAF6 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
SYCNQ0VAF6 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC3.58□□□□□ -1.84
SYCNQ0VAF6 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
SYCNQ0VAF6 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC3.58□□□□□ -1.84
SYCNQ0VAF6 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC3.58□□□□□ -1.84
SYCNQ0VAF6 MAPK6PS2-201ENST00000379571 2060 ntBASIC3.58□□□□□ -1.84
SYCNQ0VAF6 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
SYCNQ0VAF6 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SYCNQ0VAF6 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC3.58□□□□□ -1.84
SYCNQ0VAF6 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC3.58□□□□□ -1.84
SYCNQ0VAF6 MAX-203ENST00000341653 330 ntTSL 2 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms