Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
H3F3AP84243 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
H3F3AP84243 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC4.69□□□□□ -1.66
H3F3AP84243 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
H3F3AP84243 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
H3F3AP84243 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
H3F3AP84243 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
H3F3AP84243 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
H3F3AP84243 PANDAR-201ENST00000629595 1506 ntBASIC4.68□□□□□ -1.66
H3F3AP84243 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
H3F3AP84243 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
H3F3AP84243 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
H3F3AP84243 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
H3F3AP84243 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
H3F3AP84243 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
H3F3AP84243 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
H3F3AP84243 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.68□□□□□ -1.66
H3F3AP84243 MIR1182-201ENST00000408363 97 ntBASIC4.68□□□□□ -1.66
H3F3AP84243 RN7SKP229-201ENST00000410465 302 ntBASIC4.68□□□□□ -1.66
H3F3AP84243 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.68□□□□□ -1.66
H3F3AP84243 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.68□□□□□ -1.66
H3F3AP84243 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.68□□□□□ -1.66
H3F3AP84243 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.68□□□□□ -1.66
H3F3AP84243 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC4.68□□□□□ -1.66
H3F3AP84243 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.68□□□□□ -1.66
H3F3AP84243 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.68□□□□□ -1.66
H3F3AP84243 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
H3F3AP84243 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC4.68□□□□□ -1.66
H3F3AP84243 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.68□□□□□ -1.66
H3F3AP84243 EIF3KP3-201ENST00000514461 639 ntBASIC4.68□□□□□ -1.66
H3F3AP84243 AC012400.1-201ENST00000518452 381 ntBASIC4.68□□□□□ -1.66
H3F3AP84243 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.68□□□□□ -1.66
H3F3AP84243 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.68□□□□□ -1.66
H3F3AP84243 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.68□□□□□ -1.66
H3F3AP84243 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC4.68□□□□□ -1.66
H3F3AP84243 RN7SL708P-201ENST00000580952 299 ntBASIC4.68□□□□□ -1.66
H3F3AP84243 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
H3F3AP84243 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
H3F3AP84243 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.68□□□□□ -1.66
H3F3AP84243 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC4.68□□□□□ -1.66
H3F3AP84243 SUMO2P15-201ENST00000604285 278 ntBASIC4.68□□□□□ -1.66
H3F3AP84243 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.68□□□□□ -1.66
H3F3AP84243 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.68□□□□□ -1.66
H3F3AP84243 AC135068.12-201ENST00000637370 931 ntBASIC4.68□□□□□ -1.66
H3F3AP84243 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
H3F3AP84243 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC4.68□□□□□ -1.66
H3F3AP84243 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
H3F3AP84243 AC104260.2-201ENST00000623551 3497 ntBASIC4.68□□□□□ -1.66
H3F3AP84243 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.68□□□□□ -1.66
H3F3AP84243 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
H3F3AP84243 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
H3F3AP84243 UQCRC2P1-201ENST00000417777 1332 ntBASIC4.68□□□□□ -1.66
H3F3AP84243 CIR1P2-201ENST00000514821 1342 ntBASIC4.68□□□□□ -1.66
H3F3AP84243 AC011493.1-201ENST00000596753 1632 ntBASIC4.68□□□□□ -1.66
H3F3AP84243 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
H3F3AP84243 AGO3-203ENST00000373191 19687 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
H3F3AP84243 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
H3F3AP84243 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.67□□□□□ -1.66
H3F3AP84243 AC007342.5-201ENST00000571340 2142 ntBASIC4.67□□□□□ -1.66
H3F3AP84243 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
H3F3AP84243 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
H3F3AP84243 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.67□□□□□ -1.66
H3F3AP84243 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
H3F3AP84243 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.67□□□□□ -1.66
H3F3AP84243 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
H3F3AP84243 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
H3F3AP84243 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
H3F3AP84243 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
H3F3AP84243 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.67□□□□□ -1.66
H3F3AP84243 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.67□□□□□ -1.66
H3F3AP84243 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.67□□□□□ -1.66
H3F3AP84243 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
H3F3AP84243 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC4.67□□□□□ -1.66
H3F3AP84243 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
H3F3AP84243 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
H3F3AP84243 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
H3F3AP84243 NPM1P40-201ENST00000412758 733 ntBASIC4.67□□□□□ -1.66
H3F3AP84243 EI24P4-201ENST00000423683 1078 ntBASIC4.67□□□□□ -1.66
H3F3AP84243 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.67□□□□□ -1.66
H3F3AP84243 BX842559.2-201ENST00000451418 605 ntBASIC4.67□□□□□ -1.66
H3F3AP84243 RN7SL172P-201ENST00000460535 303 ntBASIC4.67□□□□□ -1.66
H3F3AP84243 RN7SL189P-201ENST00000468631 289 ntBASIC4.67□□□□□ -1.66
H3F3AP84243 AC079841.1-201ENST00000481228 950 ntBASIC4.67□□□□□ -1.66
H3F3AP84243 ENPP7P11-201ENST00000505915 627 ntBASIC4.67□□□□□ -1.66
H3F3AP84243 GTF2F2P1-201ENST00000511083 675 ntBASIC4.67□□□□□ -1.66
H3F3AP84243 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC4.67□□□□□ -1.66
H3F3AP84243 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.67□□□□□ -1.66
H3F3AP84243 AC024940.3-201ENST00000538551 316 ntBASIC4.67□□□□□ -1.66
H3F3AP84243 AC090022.1-201ENST00000546569 311 ntBASIC4.67□□□□□ -1.66
H3F3AP84243 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC4.67□□□□□ -1.66
H3F3AP84243 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
H3F3AP84243 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC4.67□□□□□ -1.66
H3F3AP84243 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.67□□□□□ -1.66
H3F3AP84243 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.67□□□□□ -1.66
H3F3AP84243 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.67□□□□□ -1.66
H3F3AP84243 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.67□□□□□ -1.66
H3F3AP84243 AC118658.2-201ENST00000618697 459 ntBASIC4.67□□□□□ -1.66
H3F3AP84243 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.67□□□□□ -1.66
H3F3AP84243 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
H3F3AP84243 AC112198.2-201ENST00000426589 6996 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms