Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CBX1P83916 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CBX1P83916 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
CBX1P83916 AC006210.2-201ENST00000367074 1545 ntBASIC5.33□□□□□ -1.56
CBX1P83916 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CBX1P83916 VN2R3P-201ENST00000422626 1412 ntBASIC5.33□□□□□ -1.56
CBX1P83916 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CBX1P83916 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
CBX1P83916 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.33□□□□□ -1.56
CBX1P83916 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CBX1P83916 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CBX1P83916 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC5.33□□□□□ -1.56
CBX1P83916 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CBX1P83916 RNA5SP110-201ENST00000362638 115 ntBASIC5.33□□□□□ -1.56
CBX1P83916 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC5.33□□□□□ -1.56
CBX1P83916 SNORA66-201ENST00000384792 133 ntBASIC5.33□□□□□ -1.56
CBX1P83916 NENFP1-201ENST00000419476 466 ntBASIC5.33□□□□□ -1.56
CBX1P83916 RPL12P43-201ENST00000420608 499 ntBASIC5.33□□□□□ -1.56
CBX1P83916 RPS12P5-201ENST00000423449 371 ntBASIC5.33□□□□□ -1.56
CBX1P83916 EIF4HP2-201ENST00000424380 563 ntBASIC5.33□□□□□ -1.56
CBX1P83916 AL139148.1-201ENST00000427122 680 ntBASIC5.33□□□□□ -1.56
CBX1P83916 NMNAT1P2-201ENST00000435192 860 ntBASIC5.33□□□□□ -1.56
CBX1P83916 AC010086.1-201ENST00000437359 1052 ntBASIC5.33□□□□□ -1.56
CBX1P83916 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.33□□□□□ -1.56
CBX1P83916 MTCO3P17-201ENST00000443775 513 ntBASIC5.33□□□□□ -1.56
CBX1P83916 AL445991.1-201ENST00000450381 475 ntBASIC5.33□□□□□ -1.56
CBX1P83916 AC239798.3-201ENST00000454459 408 ntBASIC5.33□□□□□ -1.56
CBX1P83916 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC5.33□□□□□ -1.56
CBX1P83916 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC5.33□□□□□ -1.56
CBX1P83916 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CBX1P83916 OR51K1P-201ENST00000510214 950 ntBASIC5.33□□□□□ -1.56
CBX1P83916 HMGB3P13-201ENST00000511263 607 ntBASIC5.33□□□□□ -1.56
CBX1P83916 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.33□□□□□ -1.56
CBX1P83916 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.33□□□□□ -1.56
CBX1P83916 AP000859.1-201ENST00000525536 307 ntBASIC5.33□□□□□ -1.56
CBX1P83916 AC036111.2-201ENST00000533247 901 ntBASIC5.33□□□□□ -1.56
CBX1P83916 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CBX1P83916 MIR744-201ENST00000578242 98 ntBASIC5.33□□□□□ -1.56
CBX1P83916 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.33□□□□□ -1.56
CBX1P83916 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.33□□□□□ -1.56
CBX1P83916 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.33□□□□□ -1.56
CBX1P83916 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.33□□□□□ -1.56
CBX1P83916 uc_338.31-201ENST00000615595 186 ntBASIC5.33□□□□□ -1.56
CBX1P83916 AC140113.4-201ENST00000622087 222 ntBASIC5.33□□□□□ -1.56
CBX1P83916 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC5.33□□□□□ -1.56
CBX1P83916 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.33□□□□□ -1.56
CBX1P83916 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
CBX1P83916 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CBX1P83916 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CBX1P83916 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.33□□□□□ -1.56
CBX1P83916 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CBX1P83916 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CBX1P83916 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
CBX1P83916 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CBX1P83916 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
CBX1P83916 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
CBX1P83916 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
CBX1P83916 IFIT1P1-201ENST00000400497 1449 ntBASIC5.32□□□□□ -1.56
CBX1P83916 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.32□□□□□ -1.56
CBX1P83916 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.32□□□□□ -1.56
CBX1P83916 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.32□□□□□ -1.56
CBX1P83916 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5.32□□□□□ -1.56
CBX1P83916 RNA5SP30-201ENST00000365552 115 ntBASIC5.32□□□□□ -1.56
CBX1P83916 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
CBX1P83916 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CBX1P83916 AL390316.1-201ENST00000406279 553 ntBASIC5.32□□□□□ -1.56
CBX1P83916 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.32□□□□□ -1.56
CBX1P83916 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.32□□□□□ -1.56
CBX1P83916 AC098592.2-201ENST00000413158 265 ntBASIC5.32□□□□□ -1.56
CBX1P83916 VN1R31P-201ENST00000417498 730 ntBASIC5.32□□□□□ -1.56
CBX1P83916 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.32□□□□□ -1.56
CBX1P83916 BTG3P1-201ENST00000435859 716 ntBASIC5.32□□□□□ -1.56
CBX1P83916 AC128677.1-201ENST00000436016 442 ntBASIC5.32□□□□□ -1.56
CBX1P83916 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.32□□□□□ -1.56
CBX1P83916 AC092754.1-201ENST00000472975 479 ntBASIC5.32□□□□□ -1.56
CBX1P83916 RPL12P30-201ENST00000488389 499 ntBASIC5.32□□□□□ -1.56
CBX1P83916 RPS6P4-201ENST00000494693 758 ntBASIC5.32□□□□□ -1.56
CBX1P83916 RNU4-18P-201ENST00000516751 149 ntBASIC5.32□□□□□ -1.56
CBX1P83916 AC021678.3-201ENST00000517893 476 ntBASIC5.32□□□□□ -1.56
CBX1P83916 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.32□□□□□ -1.56
CBX1P83916 AP001528.2-201ENST00000528660 1156 ntTSL 5 BASIC5.32□□□□□ -1.56
CBX1P83916 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC5.32□□□□□ -1.56
CBX1P83916 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CBX1P83916 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.32□□□□□ -1.56
CBX1P83916 AC084759.1-201ENST00000561168 290 ntBASIC5.32□□□□□ -1.56
CBX1P83916 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CBX1P83916 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.32□□□□□ -1.56
CBX1P83916 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.32□□□□□ -1.56
CBX1P83916 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC5.32□□□□□ -1.56
CBX1P83916 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.32□□□□□ -1.56
CBX1P83916 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.32□□□□□ -1.56
CBX1P83916 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC5.32□□□□□ -1.56
CBX1P83916 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.32□□□□□ -1.56
CBX1P83916 U91328.4-201ENST00000608919 517 ntBASIC5.32□□□□□ -1.56
CBX1P83916 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CBX1P83916 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC5.32□□□□□ -1.56
CBX1P83916 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
CBX1P83916 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CBX1P83916 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.32□□□□□ -1.56
CBX1P83916 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms