Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.6□□□□□ -1.67
UBA52P62987 AC073869.10-201ENST00000642016 354 ntBASIC4.6□□□□□ -1.67
UBA52P62987 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
UBA52P62987 SCN1A-220ENST00000641603 12506 ntBASIC4.6□□□□□ -1.67
UBA52P62987 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.6□□□□□ -1.67
UBA52P62987 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
UBA52P62987 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
UBA52P62987 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
UBA52P62987 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
UBA52P62987 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
UBA52P62987 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
UBA52P62987 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
UBA52P62987 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.59□□□□□ -1.67
UBA52P62987 AL159987.1-201ENST00000347911 293 ntBASIC4.59□□□□□ -1.67
UBA52P62987 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
UBA52P62987 RNA5SP131-201ENST00000365452 119 ntBASIC4.59□□□□□ -1.67
UBA52P62987 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.59□□□□□ -1.67
UBA52P62987 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
UBA52P62987 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC4.59□□□□□ -1.67
UBA52P62987 PPIAP9-201ENST00000403866 498 ntBASIC4.59□□□□□ -1.67
UBA52P62987 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.59□□□□□ -1.67
UBA52P62987 AC019205.1-201ENST00000421830 730 ntBASIC4.59□□□□□ -1.67
UBA52P62987 RIMKLBP2-201ENST00000424737 654 ntBASIC4.59□□□□□ -1.67
UBA52P62987 AL139148.1-201ENST00000427122 680 ntBASIC4.59□□□□□ -1.67
UBA52P62987 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC4.59□□□□□ -1.67
UBA52P62987 RN7SL172P-201ENST00000460535 303 ntBASIC4.59□□□□□ -1.67
UBA52P62987 RN7SL51P-201ENST00000468230 285 ntBASIC4.59□□□□□ -1.67
UBA52P62987 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.59□□□□□ -1.67
UBA52P62987 NDUFA5P12-201ENST00000503796 343 ntBASIC4.59□□□□□ -1.67
UBA52P62987 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.59□□□□□ -1.67
UBA52P62987 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC4.59□□□□□ -1.67
UBA52P62987 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.59□□□□□ -1.67
UBA52P62987 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC4.59□□□□□ -1.67
UBA52P62987 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.59□□□□□ -1.67
UBA52P62987 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.59□□□□□ -1.67
UBA52P62987 AC108738.1-201ENST00000603703 237 ntBASIC4.59□□□□□ -1.67
UBA52P62987 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.59□□□□□ -1.67
UBA52P62987 RPSAP73-201ENST00000614820 330 ntBASIC4.59□□□□□ -1.67
UBA52P62987 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.59□□□□□ -1.67
UBA52P62987 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.59□□□□□ -1.67
UBA52P62987 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
UBA52P62987 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.59□□□□□ -1.68
UBA52P62987 AC083843.2-201ENST00000568248 6253 ntBASIC4.59□□□□□ -1.68
UBA52P62987 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
UBA52P62987 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC4.59□□□□□ -1.68
UBA52P62987 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
UBA52P62987 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
UBA52P62987 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.58□□□□□ -1.68
UBA52P62987 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
UBA52P62987 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
UBA52P62987 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
UBA52P62987 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
UBA52P62987 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
UBA52P62987 AL132656.3-201ENST00000606384 1595 ntBASIC4.58□□□□□ -1.68
UBA52P62987 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
UBA52P62987 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
UBA52P62987 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC4.58□□□□□ -1.68
UBA52P62987 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.58□□□□□ -1.68
UBA52P62987 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.58□□□□□ -1.68
UBA52P62987 RNA5SP507-201ENST00000363603 121 ntBASIC4.58□□□□□ -1.68
UBA52P62987 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.58□□□□□ -1.68
UBA52P62987 NACAP7-201ENST00000407371 609 ntBASIC4.58□□□□□ -1.68
UBA52P62987 RPL35AP24-201ENST00000413846 330 ntBASIC4.58□□□□□ -1.68
UBA52P62987 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.58□□□□□ -1.68
UBA52P62987 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC4.58□□□□□ -1.68
UBA52P62987 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
UBA52P62987 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.58□□□□□ -1.68
UBA52P62987 CNOT7P2-201ENST00000441051 832 ntBASIC4.58□□□□□ -1.68
UBA52P62987 AL031584.1-201ENST00000447169 754 ntBASIC4.58□□□□□ -1.68
UBA52P62987 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC4.58□□□□□ -1.68
UBA52P62987 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC4.58□□□□□ -1.68
UBA52P62987 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
UBA52P62987 AC005532.2-201ENST00000467154 373 ntBASIC4.58□□□□□ -1.68
UBA52P62987 RN7SL329P-201ENST00000467740 299 ntBASIC4.58□□□□□ -1.68
UBA52P62987 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.58□□□□□ -1.68
UBA52P62987 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.58□□□□□ -1.68
UBA52P62987 RN7SL570P-201ENST00000484405 292 ntBASIC4.58□□□□□ -1.68
UBA52P62987 AC024558.1-201ENST00000505008 528 ntBASIC4.58□□□□□ -1.68
UBA52P62987 HMGB3P16-201ENST00000508037 287 ntBASIC4.58□□□□□ -1.68
UBA52P62987 AC021106.1-201ENST00000509020 1058 ntBASIC4.58□□□□□ -1.68
UBA52P62987 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC4.58□□□□□ -1.68
UBA52P62987 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC4.58□□□□□ -1.68
UBA52P62987 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC4.58□□□□□ -1.68
UBA52P62987 RN7SKP46-201ENST00000515942 234 ntBASIC4.58□□□□□ -1.68
UBA52P62987 AC096996.1-201ENST00000563813 325 ntBASIC4.58□□□□□ -1.68
UBA52P62987 MRPS21P7-201ENST00000566937 238 ntBASIC4.58□□□□□ -1.68
UBA52P62987 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.58□□□□□ -1.68
UBA52P62987 CASC22-201ENST00000569713 386 ntTSL 5 BASIC4.58□□□□□ -1.68
UBA52P62987 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC4.58□□□□□ -1.68
UBA52P62987 AC063977.5-201ENST00000601044 974 ntBASIC4.58□□□□□ -1.68
UBA52P62987 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.58□□□□□ -1.68
UBA52P62987 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC4.58□□□□□ -1.68
UBA52P62987 AC015914.2-201ENST00000618167 288 ntBASIC4.58□□□□□ -1.68
UBA52P62987 AP000648.2-201ENST00000624182 404 ntBASIC4.58□□□□□ -1.68
UBA52P62987 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
UBA52P62987 SAMMSON-209ENST00000641222 1100 ntBASIC4.58□□□□□ -1.68
UBA52P62987 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.58□□□□□ -1.68
UBA52P62987 TET1P1-201ENST00000426627 2301 ntBASIC4.58□□□□□ -1.68
UBA52P62987 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
UBA52P62987 LINC01355-201ENST00000566551 5444 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 137 ms