Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 TEK-205ENST00000615002 4666 ntTSL 5 BASIC4.78□□□□□ -1.64
CLDN18P56856 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.78□□□□□ -1.64
CLDN18P56856 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLDN18P56856 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLDN18P56856 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.78□□□□□ -1.64
CLDN18P56856 RNA5SP187-201ENST00000384400 119 ntBASIC4.78□□□□□ -1.64
CLDN18P56856 MIR105-2-201ENST00000385083 81 ntBASIC4.78□□□□□ -1.64
CLDN18P56856 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CLDN18P56856 DUTP5-201ENST00000406790 469 ntBASIC4.78□□□□□ -1.64
CLDN18P56856 SPTLC1P2-201ENST00000407089 121 ntBASIC4.78□□□□□ -1.64
CLDN18P56856 RNA5SP296-201ENST00000410523 111 ntBASIC4.78□□□□□ -1.64
CLDN18P56856 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.78□□□□□ -1.64
CLDN18P56856 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.78□□□□□ -1.64
CLDN18P56856 AC005033.1-201ENST00000428904 813 ntBASIC4.78□□□□□ -1.64
CLDN18P56856 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.78□□□□□ -1.64
CLDN18P56856 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC4.78□□□□□ -1.64
CLDN18P56856 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.78□□□□□ -1.64
CLDN18P56856 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CLDN18P56856 MTND6P32-201ENST00000457611 483 ntBASIC4.78□□□□□ -1.64
CLDN18P56856 RN7SL515P-201ENST00000463999 297 ntBASIC4.78□□□□□ -1.64
CLDN18P56856 RPL5P22-201ENST00000480199 884 ntBASIC4.78□□□□□ -1.64
CLDN18P56856 RPL7P40-201ENST00000481703 745 ntBASIC4.78□□□□□ -1.64
CLDN18P56856 RPS4XP20-201ENST00000505751 772 ntBASIC4.78□□□□□ -1.64
CLDN18P56856 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC4.78□□□□□ -1.64
CLDN18P56856 AC138832.1-201ENST00000522871 556 ntBASIC4.78□□□□□ -1.64
CLDN18P56856 AC018442.3-201ENST00000523025 183 ntBASIC4.78□□□□□ -1.64
CLDN18P56856 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC4.78□□□□□ -1.64
CLDN18P56856 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.78□□□□□ -1.64
CLDN18P56856 AC018552.1-201ENST00000562099 811 ntBASIC4.78□□□□□ -1.64
CLDN18P56856 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.78□□□□□ -1.64
CLDN18P56856 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.78□□□□□ -1.64
CLDN18P56856 AC009027.1-201ENST00000604510 479 ntBASIC4.78□□□□□ -1.64
CLDN18P56856 AC005252.1-201ENST00000604518 1063 ntBASIC4.78□□□□□ -1.64
CLDN18P56856 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.78□□□□□ -1.64
CLDN18P56856 AP003400.3-201ENST00000624904 346 ntBASIC4.78□□□□□ -1.64
CLDN18P56856 AC009950.2-201ENST00000636548 183 ntBASIC4.78□□□□□ -1.64
CLDN18P56856 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLDN18P56856 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CLDN18P56856 AL606537.1-201ENST00000607258 2011 ntBASIC4.78□□□□□ -1.64
CLDN18P56856 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CLDN18P56856 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLDN18P56856 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLDN18P56856 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLDN18P56856 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLDN18P56856 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
CLDN18P56856 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CLDN18P56856 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC4.78□□□□□ -1.64
CLDN18P56856 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLDN18P56856 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CLDN18P56856 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CLDN18P56856 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC4.77□□□□□ -1.65
CLDN18P56856 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.77□□□□□ -1.65
CLDN18P56856 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.77□□□□□ -1.65
CLDN18P56856 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.77□□□□□ -1.65
CLDN18P56856 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN18P56856 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN18P56856 AC003973.3-201ENST00000624863 2822 ntBASIC4.77□□□□□ -1.65
CLDN18P56856 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN18P56856 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN18P56856 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC4.77□□□□□ -1.65
CLDN18P56856 RNU1-43P-201ENST00000365052 165 ntBASIC4.77□□□□□ -1.65
CLDN18P56856 MIR105-1-201ENST00000385222 81 ntBASIC4.77□□□□□ -1.65
CLDN18P56856 MRM2-202ENST00000407040 582 ntTSL 3 BASIC4.77□□□□□ -1.65
CLDN18P56856 AL133482.1-201ENST00000415988 498 ntBASIC4.77□□□□□ -1.65
CLDN18P56856 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.77□□□□□ -1.65
CLDN18P56856 RPL12P43-201ENST00000420608 499 ntBASIC4.77□□□□□ -1.65
CLDN18P56856 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC4.77□□□□□ -1.65
CLDN18P56856 HSPE1P16-201ENST00000426640 348 ntBASIC4.77□□□□□ -1.65
CLDN18P56856 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.77□□□□□ -1.65
CLDN18P56856 BX276092.6-201ENST00000430476 250 ntBASIC4.77□□□□□ -1.65
CLDN18P56856 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.77□□□□□ -1.65
CLDN18P56856 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN18P56856 AC099670.2-201ENST00000435130 321 ntBASIC4.77□□□□□ -1.65
CLDN18P56856 AL359265.1-201ENST00000440296 795 ntBASIC4.77□□□□□ -1.65
CLDN18P56856 AL389915.2-201ENST00000454576 441 ntBASIC4.77□□□□□ -1.65
CLDN18P56856 BX276092.8-201ENST00000455722 250 ntBASIC4.77□□□□□ -1.65
CLDN18P56856 AC004815.1-201ENST00000484185 331 ntBASIC4.77□□□□□ -1.65
CLDN18P56856 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC4.77□□□□□ -1.65
CLDN18P56856 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC4.77□□□□□ -1.65
CLDN18P56856 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC4.77□□□□□ -1.65
CLDN18P56856 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.77□□□□□ -1.65
CLDN18P56856 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.77□□□□□ -1.65
CLDN18P56856 OR4A43P-201ENST00000532938 908 ntBASIC4.77□□□□□ -1.65
CLDN18P56856 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.77□□□□□ -1.65
CLDN18P56856 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC4.77□□□□□ -1.65
CLDN18P56856 AC051619.2-201ENST00000559063 397 ntBASIC4.77□□□□□ -1.65
CLDN18P56856 AC122134.1-201ENST00000565664 1104 ntBASIC4.77□□□□□ -1.65
CLDN18P56856 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC4.77□□□□□ -1.65
CLDN18P56856 SNORD39.2-201ENST00000579995 76 ntBASIC4.77□□□□□ -1.65
CLDN18P56856 AL139407.1-201ENST00000613826 1175 ntBASIC4.77□□□□□ -1.65
CLDN18P56856 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.77□□□□□ -1.65
CLDN18P56856 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.77□□□□□ -1.65
CLDN18P56856 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.77□□□□□ -1.65
CLDN18P56856 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN18P56856 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN18P56856 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.77□□□□□ -1.65
CLDN18P56856 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN18P56856 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CLDN18P56856 ZNF733P-202ENST00000444809 1573 ntBASIC4.77□□□□□ -1.65
CLDN18P56856 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 94.3 ms