Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CDH4P55283 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH4P55283 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.37□□□□□ -1.55
CDH4P55283 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
CDH4P55283 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.37□□□□□ -1.55
CDH4P55283 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
CDH4P55283 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH4P55283 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH4P55283 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CDH4P55283 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CDH4P55283 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH4P55283 RNU1-74P-201ENST00000384108 171 ntBASIC5.37□□□□□ -1.55
CDH4P55283 MIR589-201ENST00000385238 99 ntBASIC5.37□□□□□ -1.55
CDH4P55283 MIR1182-201ENST00000408363 97 ntBASIC5.37□□□□□ -1.55
CDH4P55283 U3.36-201ENST00000408418 213 ntBASIC5.37□□□□□ -1.55
CDH4P55283 RN7SKP126-201ENST00000411143 300 ntBASIC5.37□□□□□ -1.55
CDH4P55283 GPS2P1-201ENST00000411761 986 ntBASIC5.37□□□□□ -1.55
CDH4P55283 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.37□□□□□ -1.55
CDH4P55283 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC5.37□□□□□ -1.55
CDH4P55283 SERPINA7P1-201ENST00000443077 631 ntBASIC5.37□□□□□ -1.55
CDH4P55283 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.37□□□□□ -1.55
CDH4P55283 AP002371.1-201ENST00000463604 433 ntBASIC5.37□□□□□ -1.55
CDH4P55283 RN7SL189P-201ENST00000468631 289 ntBASIC5.37□□□□□ -1.55
CDH4P55283 RPS18P6-201ENST00000476880 458 ntBASIC5.37□□□□□ -1.55
CDH4P55283 RPL15P21-201ENST00000495592 567 ntBASIC5.37□□□□□ -1.55
CDH4P55283 AC008953.1-201ENST00000497334 318 ntBASIC5.37□□□□□ -1.55
CDH4P55283 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.37□□□□□ -1.55
CDH4P55283 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.37□□□□□ -1.55
CDH4P55283 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.37□□□□□ -1.55
CDH4P55283 RN7SL708P-201ENST00000580952 299 ntBASIC5.37□□□□□ -1.55
CDH4P55283 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.37□□□□□ -1.55
CDH4P55283 AC013244.1-201ENST00000604279 193 ntBASIC5.37□□□□□ -1.55
CDH4P55283 AC011626.1-201ENST00000604710 562 ntBASIC5.37□□□□□ -1.55
CDH4P55283 TAS2R6P-201ENST00000605022 826 ntBASIC5.37□□□□□ -1.55
CDH4P55283 AC099494.2-201ENST00000623371 978 ntBASIC5.37□□□□□ -1.55
CDH4P55283 AC092451.3-201ENST00000625067 1343 ntBASIC5.37□□□□□ -1.55
CDH4P55283 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
CDH4P55283 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
CDH4P55283 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.37□□□□□ -1.55
CDH4P55283 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
CDH4P55283 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.37□□□□□ -1.55
CDH4P55283 PANDAR-201ENST00000629595 1506 ntBASIC5.37□□□□□ -1.55
CDH4P55283 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
CDH4P55283 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
CDH4P55283 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.37□□□□□ -1.55
CDH4P55283 HSPA8P14-201ENST00000552265 1805 ntBASIC5.37□□□□□ -1.55
CDH4P55283 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDH4P55283 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.36□□□□□ -1.55
CDH4P55283 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CDH4P55283 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDH4P55283 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
CDH4P55283 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CDH4P55283 RPL23P2-201ENST00000320371 421 ntBASIC5.36□□□□□ -1.55
CDH4P55283 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC5.36□□□□□ -1.55
CDH4P55283 MIR105-2-201ENST00000385083 81 ntBASIC5.36□□□□□ -1.55
CDH4P55283 RNA5SP241-201ENST00000391326 114 ntBASIC5.36□□□□□ -1.55
CDH4P55283 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.36□□□□□ -1.55
CDH4P55283 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CDH4P55283 RN7SKP278-201ENST00000410504 342 ntBASIC5.36□□□□□ -1.55
CDH4P55283 BMS1P13-201ENST00000417301 885 ntBASIC5.36□□□□□ -1.55
CDH4P55283 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.36□□□□□ -1.55
CDH4P55283 EI24P4-201ENST00000423683 1078 ntBASIC5.36□□□□□ -1.55
CDH4P55283 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.36□□□□□ -1.55
CDH4P55283 RPS27AP6-201ENST00000427962 448 ntBASIC5.36□□□□□ -1.55
CDH4P55283 HSPD1P12-201ENST00000429127 1069 ntBASIC5.36□□□□□ -1.55
CDH4P55283 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.36□□□□□ -1.55
CDH4P55283 RN7SL814P-201ENST00000487715 300 ntBASIC5.36□□□□□ -1.55
CDH4P55283 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.36□□□□□ -1.55
CDH4P55283 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.36□□□□□ -1.55
CDH4P55283 IMPA1P1-201ENST00000510718 842 ntBASIC5.36□□□□□ -1.55
CDH4P55283 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.36□□□□□ -1.55
CDH4P55283 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
CDH4P55283 RFPL4AP3-201ENST00000515267 345 ntBASIC5.36□□□□□ -1.55
CDH4P55283 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.36□□□□□ -1.55
CDH4P55283 AC130364.2-201ENST00000528639 604 ntBASIC5.36□□□□□ -1.55
CDH4P55283 OR11J2P-201ENST00000555298 907 ntBASIC5.36□□□□□ -1.55
CDH4P55283 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.36□□□□□ -1.55
CDH4P55283 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CDH4P55283 AP005131.7-201ENST00000610087 611 ntBASIC5.36□□□□□ -1.55
CDH4P55283 AC016769.4-201ENST00000616893 535 ntBASIC5.36□□□□□ -1.55
CDH4P55283 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.36□□□□□ -1.55
CDH4P55283 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC5.36□□□□□ -1.55
CDH4P55283 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDH4P55283 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CDH4P55283 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.36□□□□□ -1.55
CDH4P55283 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDH4P55283 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.36□□□□□ -1.55
CDH4P55283 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
CDH4P55283 AL603750.1-201ENST00000624216 1717 ntBASIC5.36□□□□□ -1.55
CDH4P55283 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
CDH4P55283 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
CDH4P55283 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.36□□□□□ -1.55
CDH4P55283 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.36□□□□□ -1.55
CDH4P55283 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.36□□□□□ -1.55
CDH4P55283 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDH4P55283 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
CDH4P55283 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.35□□□□□ -1.55
CDH4P55283 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.35□□□□□ -1.55
CDH4P55283 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.35□□□□□ -1.55
CDH4P55283 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms