Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 RN7SL290P-201ENST00000578661 300 ntBASIC6.23□□□□□ -1.41
NUP98P52948 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC6.23□□□□□ -1.41
NUP98P52948 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
NUP98P52948 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
NUP98P52948 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.23□□□□□ -1.41
NUP98P52948 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC6.23□□□□□ -1.41
NUP98P52948 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
NUP98P52948 UQCRC2P1-201ENST00000417777 1332 ntBASIC6.23□□□□□ -1.41
NUP98P52948 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
NUP98P52948 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
NUP98P52948 RPS4XP9-201ENST00000405151 780 ntBASIC6.22□□□□□ -1.41
NUP98P52948 RN7SKP106-201ENST00000410832 272 ntBASIC6.22□□□□□ -1.41
NUP98P52948 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC6.22□□□□□ -1.41
NUP98P52948 AC025674.1-201ENST00000507074 324 ntBASIC6.22□□□□□ -1.41
NUP98P52948 ENPP7P9-201ENST00000514456 627 ntBASIC6.22□□□□□ -1.41
NUP98P52948 OR5M2P-201ENST00000529003 936 ntBASIC6.22□□□□□ -1.41
NUP98P52948 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NUP98P52948 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC6.22□□□□□ -1.41
NUP98P52948 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC6.22□□□□□ -1.41
NUP98P52948 AL138960.1-201ENST00000613838 513 ntBASIC6.22□□□□□ -1.41
NUP98P52948 AL731566.2-201ENST00000618971 317 ntBASIC6.22□□□□□ -1.41
NUP98P52948 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC6.22□□□□□ -1.41
NUP98P52948 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.22□□□□□ -1.41
NUP98P52948 AC079777.1-201ENST00000623836 1953 ntBASIC6.22□□□□□ -1.41
NUP98P52948 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NUP98P52948 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
NUP98P52948 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NUP98P52948 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC6.22□□□□□ -1.41
NUP98P52948 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC6.22□□□□□ -1.41
NUP98P52948 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NUP98P52948 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NUP98P52948 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
NUP98P52948 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NUP98P52948 MEF2C-244ENST00000636998 5936 ntTSL 5 BASIC6.22□□□□□ -1.41
NUP98P52948 OR1L6-202ENST00000373684 1044 ntBASIC6.22□□□□□ -1.41
NUP98P52948 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC6.22□□□□□ -1.41
NUP98P52948 AL645608.4-201ENST00000423619 154 ntBASIC6.22□□□□□ -1.41
NUP98P52948 EIF2S2P3-201ENST00000428356 999 ntBASIC6.22□□□□□ -1.41
NUP98P52948 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC6.22□□□□□ -1.41
NUP98P52948 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC6.22□□□□□ -1.41
NUP98P52948 AC006967.1-201ENST00000467608 589 ntBASIC6.22□□□□□ -1.41
NUP98P52948 AC013356.1-201ENST00000489027 564 ntBASIC6.22□□□□□ -1.41
NUP98P52948 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC6.22□□□□□ -1.41
NUP98P52948 RPSAP51-201ENST00000497462 645 ntBASIC6.22□□□□□ -1.41
NUP98P52948 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC6.22□□□□□ -1.41
NUP98P52948 OR8G5-201ENST00000524943 1041 ntBASIC6.22□□□□□ -1.41
NUP98P52948 AP006289.1-201ENST00000538089 277 ntBASIC6.22□□□□□ -1.41
NUP98P52948 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC6.22□□□□□ -1.41
NUP98P52948 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC6.22□□□□□ -1.41
NUP98P52948 AC018558.5-201ENST00000565840 952 ntBASIC6.22□□□□□ -1.41
NUP98P52948 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.22□□□□□ -1.41
NUP98P52948 MYLK-221ENST00000583087 678 ntTSL 4 BASIC6.22□□□□□ -1.41
NUP98P52948 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.22□□□□□ -1.41
NUP98P52948 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC6.22□□□□□ -1.41
NUP98P52948 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC6.22□□□□□ -1.41
NUP98P52948 AL162574.1-201ENST00000615702 950 ntBASIC6.22□□□□□ -1.41
NUP98P52948 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NUP98P52948 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC6.22□□□□□ -1.41
NUP98P52948 AC010435.1-201ENST00000623353 1177 ntBASIC6.22□□□□□ -1.41
NUP98P52948 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
NUP98P52948 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.21□□□□□ -1.41
NUP98P52948 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
NUP98P52948 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
NUP98P52948 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC6.21□□□□□ -1.41
NUP98P52948 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NUP98P52948 SNORA70F-201ENST00000384142 135 ntBASIC6.21□□□□□ -1.42
NUP98P52948 SNORA48.4-201ENST00000391089 134 ntBASIC6.21□□□□□ -1.42
NUP98P52948 P2RY10P2-201ENST00000416730 913 ntBASIC6.21□□□□□ -1.42
NUP98P52948 AC092570.3-201ENST00000420113 693 ntBASIC6.21□□□□□ -1.42
NUP98P52948 AC005154.2-201ENST00000438110 379 ntBASIC6.21□□□□□ -1.42
NUP98P52948 TXNP2-201ENST00000443918 295 ntBASIC6.21□□□□□ -1.42
NUP98P52948 FTH1P2-201ENST00000466086 412 ntBASIC6.21□□□□□ -1.42
NUP98P52948 NDUFA5P9-201ENST00000472609 340 ntBASIC6.21□□□□□ -1.42
NUP98P52948 RN7SL244P-201ENST00000493405 297 ntBASIC6.21□□□□□ -1.42
NUP98P52948 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.21□□□□□ -1.42
NUP98P52948 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC6.21□□□□□ -1.42
NUP98P52948 RNU4ATAC18P-201ENST00000516179 126 ntBASIC6.21□□□□□ -1.42
NUP98P52948 C1GALT1P3-201ENST00000522049 819 ntBASIC6.21□□□□□ -1.42
NUP98P52948 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC6.21□□□□□ -1.42
NUP98P52948 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NUP98P52948 AC116553.2-201ENST00000564203 463 ntBASIC6.21□□□□□ -1.42
NUP98P52948 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.21□□□□□ -1.42
NUP98P52948 AC104687.2-201ENST00000604442 342 ntBASIC6.21□□□□□ -1.42
NUP98P52948 AC108359.1-201ENST00000616451 1211 ntBASIC6.21□□□□□ -1.42
NUP98P52948 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC6.21□□□□□ -1.42
NUP98P52948 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NUP98P52948 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
NUP98P52948 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC6.21□□□□□ -1.42
NUP98P52948 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NUP98P52948 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
NUP98P52948 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC6.21□□□□□ -1.42
NUP98P52948 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
NUP98P52948 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.21□□□□□ -1.42
NUP98P52948 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.21□□□□□ -1.42
NUP98P52948 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
NUP98P52948 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
NUP98P52948 OR4K15-201ENST00000305051 1216 ntBASIC6.2□□□□□ -1.42
NUP98P52948 SNORA73.1-201ENST00000363107 205 ntBASIC6.2□□□□□ -1.42
NUP98P52948 Z97832.1-201ENST00000402490 328 ntBASIC6.2□□□□□ -1.42
NUP98P52948 AL021331.1-201ENST00000402817 582 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms