Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.65□□□□□ -1.67
HCFC1P51610 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC4.65□□□□□ -1.67
HCFC1P51610 AC112498.1-201ENST00000444401 332 ntBASIC4.65□□□□□ -1.67
HCFC1P51610 MTND3P4-201ENST00000453537 303 ntBASIC4.65□□□□□ -1.67
HCFC1P51610 snoU13.20-201ENST00000459180 104 ntBASIC4.65□□□□□ -1.67
HCFC1P51610 RN7SL346P-201ENST00000491561 294 ntBASIC4.65□□□□□ -1.67
HCFC1P51610 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.65□□□□□ -1.67
HCFC1P51610 AL671862.1-201ENST00000515851 349 ntBASIC4.65□□□□□ -1.67
HCFC1P51610 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC4.65□□□□□ -1.67
HCFC1P51610 AC025857.1-201ENST00000525252 377 ntBASIC4.65□□□□□ -1.67
HCFC1P51610 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC4.65□□□□□ -1.67
HCFC1P51610 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.65□□□□□ -1.67
HCFC1P51610 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.65□□□□□ -1.67
HCFC1P51610 AC005341.1-201ENST00000571086 708 ntBASIC4.65□□□□□ -1.67
HCFC1P51610 AC011840.5-201ENST00000582125 771 ntBASIC4.65□□□□□ -1.67
HCFC1P51610 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC4.65□□□□□ -1.67
HCFC1P51610 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
HCFC1P51610 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC4.64□□□□□ -1.67
HCFC1P51610 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HCFC1P51610 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC4.64□□□□□ -1.67
HCFC1P51610 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HCFC1P51610 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
HCFC1P51610 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC4.64□□□□□ -1.67
HCFC1P51610 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
HCFC1P51610 EEF1A1P33-201ENST00000554413 1362 ntBASIC4.64□□□□□ -1.67
HCFC1P51610 RNA5SP123-201ENST00000363244 119 ntBASIC4.64□□□□□ -1.67
HCFC1P51610 AC016397.1-201ENST00000412463 242 ntBASIC4.64□□□□□ -1.67
HCFC1P51610 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.64□□□□□ -1.67
HCFC1P51610 RPL5P2-201ENST00000429598 854 ntBASIC4.64□□□□□ -1.67
HCFC1P51610 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.64□□□□□ -1.67
HCFC1P51610 CEACAMP9-201ENST00000442990 513 ntBASIC4.64□□□□□ -1.67
HCFC1P51610 AC073072.2-201ENST00000447425 348 ntBASIC4.64□□□□□ -1.67
HCFC1P51610 HMGN1P8-201ENST00000463578 288 ntBASIC4.64□□□□□ -1.67
HCFC1P51610 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
HCFC1P51610 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.64□□□□□ -1.67
HCFC1P51610 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC4.64□□□□□ -1.67
HCFC1P51610 TMF1P1-201ENST00000576058 373 ntBASIC4.64□□□□□ -1.67
HCFC1P51610 AP000919.1-201ENST00000582850 985 ntBASIC4.64□□□□□ -1.67
HCFC1P51610 MIR4691-201ENST00000583764 85 ntBASIC4.64□□□□□ -1.67
HCFC1P51610 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC4.64□□□□□ -1.67
HCFC1P51610 AL583832.1-201ENST00000603227 784 ntBASIC4.64□□□□□ -1.67
HCFC1P51610 AC005377.1-201ENST00000605126 456 ntBASIC4.64□□□□□ -1.67
HCFC1P51610 AC012557.1-201ENST00000607115 611 ntBASIC4.64□□□□□ -1.67
HCFC1P51610 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.64□□□□□ -1.67
HCFC1P51610 MIR6758-201ENST00000620653 63 ntBASIC4.64□□□□□ -1.67
HCFC1P51610 AC112694.2-201ENST00000623697 768 ntBASIC4.64□□□□□ -1.67
HCFC1P51610 AP001153.1-201ENST00000641024 338 ntBASIC4.64□□□□□ -1.67
HCFC1P51610 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
HCFC1P51610 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC4.64□□□□□ -1.67
HCFC1P51610 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HCFC1P51610 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HCFC1P51610 AL355488.2-201ENST00000609909 2850 ntBASIC4.64□□□□□ -1.67
HCFC1P51610 AP000473.2-201ENST00000602659 1537 ntBASIC4.64□□□□□ -1.67
HCFC1P51610 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HCFC1P51610 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
HCFC1P51610 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HCFC1P51610 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HCFC1P51610 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
HCFC1P51610 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
HCFC1P51610 AC092451.3-201ENST00000625067 1343 ntBASIC4.63□□□□□ -1.67
HCFC1P51610 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
HCFC1P51610 AC096921.1-201ENST00000411661 375 ntBASIC4.63□□□□□ -1.67
HCFC1P51610 NPM1P40-201ENST00000412758 733 ntBASIC4.63□□□□□ -1.67
HCFC1P51610 AL590139.1-201ENST00000416267 400 ntBASIC4.63□□□□□ -1.67
HCFC1P51610 RNGTTP1-201ENST00000420965 728 ntBASIC4.63□□□□□ -1.67
HCFC1P51610 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC4.63□□□□□ -1.67
HCFC1P51610 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC4.63□□□□□ -1.67
HCFC1P51610 MGAT2P2-201ENST00000427194 797 ntBASIC4.63□□□□□ -1.67
HCFC1P51610 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HCFC1P51610 KNOP1P3-201ENST00000446933 426 ntBASIC4.63□□□□□ -1.67
HCFC1P51610 REG1CP-206ENST00000447469 496 ntBASIC4.63□□□□□ -1.67
HCFC1P51610 Z92846.1-201ENST00000456203 268 ntBASIC4.63□□□□□ -1.67
HCFC1P51610 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC4.63□□□□□ -1.67
HCFC1P51610 AC090058.1-201ENST00000498788 435 ntBASIC4.63□□□□□ -1.67
HCFC1P51610 OR51K1P-201ENST00000510214 950 ntBASIC4.63□□□□□ -1.67
HCFC1P51610 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.63□□□□□ -1.67
HCFC1P51610 HNRNPRP2-201ENST00000528421 743 ntBASIC4.63□□□□□ -1.67
HCFC1P51610 BNIP3P1-201ENST00000547295 580 ntBASIC4.63□□□□□ -1.67
HCFC1P51610 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC4.63□□□□□ -1.67
HCFC1P51610 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC4.63□□□□□ -1.67
HCFC1P51610 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.63□□□□□ -1.67
HCFC1P51610 AC125494.2-201ENST00000602431 657 ntBASIC4.63□□□□□ -1.67
HCFC1P51610 AC096586.2-201ENST00000610260 441 ntBASIC4.63□□□□□ -1.67
HCFC1P51610 AL731566.2-201ENST00000618971 317 ntBASIC4.63□□□□□ -1.67
HCFC1P51610 AC073592.7-201ENST00000623659 507 ntBASIC4.63□□□□□ -1.67
HCFC1P51610 AL163152.1-201ENST00000642001 374 ntBASIC4.63□□□□□ -1.67
HCFC1P51610 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC4.63□□□□□ -1.67
HCFC1P51610 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HCFC1P51610 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HCFC1P51610 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
HCFC1P51610 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
HCFC1P51610 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HCFC1P51610 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HCFC1P51610 THAP12P4-201ENST00000528321 2266 ntBASIC4.63□□□□□ -1.67
HCFC1P51610 AP005435.3-201ENST00000531260 3198 ntBASIC4.63□□□□□ -1.67
HCFC1P51610 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.63□□□□□ -1.67
HCFC1P51610 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HCFC1P51610 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
HCFC1P51610 MIR105-1-201ENST00000385222 81 ntBASIC4.63□□□□□ -1.67
HCFC1P51610 GAPDHP15-201ENST00000398586 975 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms