Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
HOXA1P49639 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
HOXA1P49639 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
HOXA1P49639 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.74□□□□□ -1.65
HOXA1P49639 RPL22P22-201ENST00000395439 379 ntBASIC4.74□□□□□ -1.65
HOXA1P49639 ARSFP1-201ENST00000398758 477 ntBASIC4.74□□□□□ -1.65
HOXA1P49639 AL034417.1-201ENST00000399343 800 ntBASIC4.74□□□□□ -1.65
HOXA1P49639 RNU6-584P-201ENST00000410350 95 ntBASIC4.74□□□□□ -1.65
HOXA1P49639 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC4.74□□□□□ -1.65
HOXA1P49639 AL606495.1-201ENST00000422100 813 ntBASIC4.74□□□□□ -1.65
HOXA1P49639 VN1R42P-201ENST00000424651 344 ntBASIC4.74□□□□□ -1.65
HOXA1P49639 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.74□□□□□ -1.65
HOXA1P49639 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC4.74□□□□□ -1.65
HOXA1P49639 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC4.74□□□□□ -1.65
HOXA1P49639 BX119904.1-201ENST00000432026 348 ntBASIC4.74□□□□□ -1.65
HOXA1P49639 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC4.74□□□□□ -1.65
HOXA1P49639 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HOXA1P49639 AC128677.1-201ENST00000436016 442 ntBASIC4.74□□□□□ -1.65
HOXA1P49639 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.74□□□□□ -1.65
HOXA1P49639 MTND1P26-201ENST00000440488 538 ntBASIC4.74□□□□□ -1.65
HOXA1P49639 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.74□□□□□ -1.65
HOXA1P49639 AL353898.1-201ENST00000444055 238 ntBASIC4.74□□□□□ -1.65
HOXA1P49639 AC092601.1-201ENST00000444526 383 ntBASIC4.74□□□□□ -1.65
HOXA1P49639 AC097359.1-201ENST00000447946 463 ntBASIC4.74□□□□□ -1.65
HOXA1P49639 AC002553.3-201ENST00000453002 341 ntBASIC4.74□□□□□ -1.65
HOXA1P49639 OFD1P3Y-201ENST00000453312 783 ntBASIC4.74□□□□□ -1.65
HOXA1P49639 RPL12P39-201ENST00000455456 496 ntBASIC4.74□□□□□ -1.65
HOXA1P49639 RPL38P3-201ENST00000484463 213 ntBASIC4.74□□□□□ -1.65
HOXA1P49639 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.74□□□□□ -1.65
HOXA1P49639 RNA5SP464-201ENST00000516251 108 ntBASIC4.74□□□□□ -1.65
HOXA1P49639 RNA5SP434-201ENST00000516647 121 ntBASIC4.74□□□□□ -1.65
HOXA1P49639 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.74□□□□□ -1.65
HOXA1P49639 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.74□□□□□ -1.65
HOXA1P49639 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC4.74□□□□□ -1.65
HOXA1P49639 AP001804.2-201ENST00000533932 910 ntBASIC4.74□□□□□ -1.65
HOXA1P49639 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HOXA1P49639 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HOXA1P49639 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC4.74□□□□□ -1.65
HOXA1P49639 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC4.74□□□□□ -1.65
HOXA1P49639 AC025809.1-201ENST00000585336 560 ntTSL 4 BASIC4.74□□□□□ -1.65
HOXA1P49639 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.74□□□□□ -1.65
HOXA1P49639 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC4.74□□□□□ -1.65
HOXA1P49639 AC005034.4-201ENST00000603612 899 ntBASIC4.74□□□□□ -1.65
HOXA1P49639 IGKV2OR2-1-201ENST00000605129 304 ntBASIC4.74□□□□□ -1.65
HOXA1P49639 AL159169.2-201ENST00000610061 1269 ntBASIC4.74□□□□□ -1.65
HOXA1P49639 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HOXA1P49639 AC007275.1-201ENST00000621243 671 ntBASIC4.74□□□□□ -1.65
HOXA1P49639 AP001005.3-201ENST00000622049 129 ntBASIC4.74□□□□□ -1.65
HOXA1P49639 AP000770.2-201ENST00000623694 100 ntBASIC4.74□□□□□ -1.65
HOXA1P49639 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC4.74□□□□□ -1.65
HOXA1P49639 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HOXA1P49639 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HOXA1P49639 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.74□□□□□ -1.65
HOXA1P49639 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC4.74□□□□□ -1.65
HOXA1P49639 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HOXA1P49639 AP001273.1-201ENST00000624493 3152 ntBASIC4.74□□□□□ -1.65
HOXA1P49639 OR14L1P-202ENST00000641545 3009 ntBASIC4.74□□□□□ -1.65
HOXA1P49639 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.74□□□□□ -1.65
HOXA1P49639 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.74□□□□□ -1.65
HOXA1P49639 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
HOXA1P49639 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
HOXA1P49639 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HOXA1P49639 AC007996.1-201ENST00000620414 2821 ntBASIC4.73□□□□□ -1.65
HOXA1P49639 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
HOXA1P49639 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.73□□□□□ -1.65
HOXA1P49639 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.73□□□□□ -1.65
HOXA1P49639 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
HOXA1P49639 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC4.73□□□□□ -1.65
HOXA1P49639 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HOXA1P49639 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.73□□□□□ -1.65
HOXA1P49639 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HOXA1P49639 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
HOXA1P49639 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
HOXA1P49639 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
HOXA1P49639 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
HOXA1P49639 RNU6-481P-201ENST00000384194 107 ntBASIC4.73□□□□□ -1.65
HOXA1P49639 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
HOXA1P49639 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
HOXA1P49639 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HOXA1P49639 PSMA6P1-201ENST00000400275 741 ntBASIC4.73□□□□□ -1.65
HOXA1P49639 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC4.73□□□□□ -1.65
HOXA1P49639 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.73□□□□□ -1.65
HOXA1P49639 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.73□□□□□ -1.65
HOXA1P49639 AC130360.1-201ENST00000425489 1117 ntBASIC4.73□□□□□ -1.65
HOXA1P49639 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.73□□□□□ -1.65
HOXA1P49639 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC4.73□□□□□ -1.65
HOXA1P49639 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.73□□□□□ -1.65
HOXA1P49639 AL022324.2-201ENST00000434827 780 ntBASIC4.73□□□□□ -1.65
HOXA1P49639 AC046176.1-201ENST00000435260 1170 ntBASIC4.73□□□□□ -1.65
HOXA1P49639 UBQLN1P1-207ENST00000441056 1169 ntBASIC4.73□□□□□ -1.65
HOXA1P49639 EIF5AP4-201ENST00000441206 465 ntBASIC4.73□□□□□ -1.65
HOXA1P49639 RPL7P55-201ENST00000450522 746 ntBASIC4.73□□□□□ -1.65
HOXA1P49639 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
HOXA1P49639 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC4.73□□□□□ -1.65
HOXA1P49639 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.73□□□□□ -1.65
HOXA1P49639 AC011225.1-201ENST00000457751 369 ntBASIC4.73□□□□□ -1.65
HOXA1P49639 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.73□□□□□ -1.65
HOXA1P49639 RPSAP39-201ENST00000467439 883 ntBASIC4.73□□□□□ -1.65
HOXA1P49639 RPL7AP10-201ENST00000481016 791 ntBASIC4.73□□□□□ -1.65
HOXA1P49639 AC090638.1-201ENST00000498296 909 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms