Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 RNA5SP428-201ENST00000365129 132 ntBASIC5.51□□□□□ -1.53
TNFSF9P41273 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TNFSF9P41273 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
TNFSF9P41273 U3.32-201ENST00000408116 212 ntBASIC5.51□□□□□ -1.53
TNFSF9P41273 SNORA77-201ENST00000408716 125 ntBASIC5.51□□□□□ -1.53
TNFSF9P41273 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.51□□□□□ -1.53
TNFSF9P41273 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.51□□□□□ -1.53
TNFSF9P41273 AL590762.4-201ENST00000425885 253 ntBASIC5.51□□□□□ -1.53
TNFSF9P41273 AC046176.1-201ENST00000435260 1170 ntBASIC5.51□□□□□ -1.53
TNFSF9P41273 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC5.51□□□□□ -1.53
TNFSF9P41273 TCEA1P1-201ENST00000449716 880 ntBASIC5.51□□□□□ -1.53
TNFSF9P41273 GAPDHP14-201ENST00000450472 937 ntBASIC5.51□□□□□ -1.53
TNFSF9P41273 IGHV5-78-201ENST00000450948 295 ntBASIC5.51□□□□□ -1.53
TNFSF9P41273 RPL7P61-201ENST00000451721 751 ntBASIC5.51□□□□□ -1.53
TNFSF9P41273 AC005412.2-201ENST00000492004 341 ntBASIC5.51□□□□□ -1.53
TNFSF9P41273 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TNFSF9P41273 NIFKP7-201ENST00000503365 834 ntBASIC5.51□□□□□ -1.53
TNFSF9P41273 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC5.51□□□□□ -1.53
TNFSF9P41273 COX6B1P5-201ENST00000509843 249 ntBASIC5.51□□□□□ -1.53
TNFSF9P41273 RN7SKP260-201ENST00000516907 149 ntBASIC5.51□□□□□ -1.53
TNFSF9P41273 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.51□□□□□ -1.53
TNFSF9P41273 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC5.51□□□□□ -1.53
TNFSF9P41273 OR5AZ1P-201ENST00000527448 943 ntBASIC5.51□□□□□ -1.53
TNFSF9P41273 OR7E128P-201ENST00000532736 1024 ntBASIC5.51□□□□□ -1.53
TNFSF9P41273 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.51□□□□□ -1.53
TNFSF9P41273 OR1F2P-201ENST00000570470 933 ntBASIC5.51□□□□□ -1.53
TNFSF9P41273 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC5.51□□□□□ -1.53
TNFSF9P41273 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TNFSF9P41273 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.51□□□□□ -1.53
TNFSF9P41273 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.51□□□□□ -1.53
TNFSF9P41273 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TNFSF9P41273 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
TNFSF9P41273 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TNFSF9P41273 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
TNFSF9P41273 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
TNFSF9P41273 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TNFSF9P41273 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TNFSF9P41273 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.5□□□□□ -1.53
TNFSF9P41273 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TNFSF9P41273 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TNFSF9P41273 AC004158.1-201ENST00000564508 4319 ntBASIC5.5□□□□□ -1.53
TNFSF9P41273 RN7SKP113-201ENST00000363891 295 ntBASIC5.5□□□□□ -1.53
TNFSF9P41273 SNORA66-201ENST00000384792 133 ntBASIC5.5□□□□□ -1.53
TNFSF9P41273 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TNFSF9P41273 AL645733.1-201ENST00000402250 217 ntBASIC5.5□□□□□ -1.53
TNFSF9P41273 NPM1P38-201ENST00000403835 865 ntBASIC5.5□□□□□ -1.53
TNFSF9P41273 AC079809.1-201ENST00000415468 276 ntBASIC5.5□□□□□ -1.53
TNFSF9P41273 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.5□□□□□ -1.53
TNFSF9P41273 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.5□□□□□ -1.53
TNFSF9P41273 RPL5P2-201ENST00000429598 854 ntBASIC5.5□□□□□ -1.53
TNFSF9P41273 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.5□□□□□ -1.53
TNFSF9P41273 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
TNFSF9P41273 RPL7AP61-201ENST00000443410 636 ntBASIC5.5□□□□□ -1.53
TNFSF9P41273 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.5□□□□□ -1.53
TNFSF9P41273 PRPF38AP1-201ENST00000451976 933 ntBASIC5.5□□□□□ -1.53
TNFSF9P41273 OR52E3P-201ENST00000452083 936 ntBASIC5.5□□□□□ -1.53
TNFSF9P41273 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.5□□□□□ -1.53
TNFSF9P41273 AC098976.1-201ENST00000513014 541 ntBASIC5.5□□□□□ -1.53
TNFSF9P41273 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.5□□□□□ -1.53
TNFSF9P41273 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.5□□□□□ -1.53
TNFSF9P41273 EIF4A2P5-201ENST00000529914 499 ntBASIC5.5□□□□□ -1.53
TNFSF9P41273 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC5.5□□□□□ -1.53
TNFSF9P41273 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
TNFSF9P41273 NPM1P5-201ENST00000557228 838 ntBASIC5.5□□□□□ -1.53
TNFSF9P41273 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.5□□□□□ -1.53
TNFSF9P41273 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
TNFSF9P41273 MEMO1P5-201ENST00000604810 406 ntBASIC5.5□□□□□ -1.53
TNFSF9P41273 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.5□□□□□ -1.53
TNFSF9P41273 AC116651.1-201ENST00000609724 556 ntBASIC5.5□□□□□ -1.53
TNFSF9P41273 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.5□□□□□ -1.53
TNFSF9P41273 AC091932.2-201ENST00000623014 291 ntBASIC5.5□□□□□ -1.53
TNFSF9P41273 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
TNFSF9P41273 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
TNFSF9P41273 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TNFSF9P41273 CASC19-221ENST00000641309 1382 ntBASIC5.5□□□□□ -1.53
TNFSF9P41273 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TNFSF9P41273 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.5□□□□□ -1.53
TNFSF9P41273 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
TNFSF9P41273 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
TNFSF9P41273 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.5□□□□□ -1.53
TNFSF9P41273 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.5□□□□□ -1.53
TNFSF9P41273 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
TNFSF9P41273 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
TNFSF9P41273 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
TNFSF9P41273 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
TNFSF9P41273 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TNFSF9P41273 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TNFSF9P41273 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
TNFSF9P41273 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.49□□□□□ -1.53
TNFSF9P41273 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
TNFSF9P41273 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.49□□□□□ -1.53
TNFSF9P41273 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.49□□□□□ -1.53
TNFSF9P41273 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.49□□□□□ -1.53
TNFSF9P41273 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.49□□□□□ -1.53
TNFSF9P41273 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TNFSF9P41273 AL449283.1-201ENST00000602631 3403 ntBASIC5.49□□□□□ -1.53
TNFSF9P41273 RN7SKP95-201ENST00000362860 303 ntBASIC5.49□□□□□ -1.53
TNFSF9P41273 MIR550A3-201ENST00000390735 95 ntBASIC5.49□□□□□ -1.53
TNFSF9P41273 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.49□□□□□ -1.53
TNFSF9P41273 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms