Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 AC012254.3-201ENST00000591183 2117 ntBASIC6.38□□□□□ -1.39
LTBRP36941 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
LTBRP36941 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
LTBRP36941 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
LTBRP36941 FLJ42393-201ENST00000623801 2270 ntBASIC6.38□□□□□ -1.39
LTBRP36941 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
LTBRP36941 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
LTBRP36941 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
LTBRP36941 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.38□□□□□ -1.39
LTBRP36941 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
LTBRP36941 AC009237.3-203ENST00000442128 3551 ntBASIC6.38□□□□□ -1.39
LTBRP36941 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC6.38□□□□□ -1.39
LTBRP36941 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.38□□□□□ -1.39
LTBRP36941 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
LTBRP36941 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
LTBRP36941 AL035419.1-201ENST00000397037 564 ntBASIC6.38□□□□□ -1.39
LTBRP36941 MIR541-201ENST00000401360 84 ntBASIC6.38□□□□□ -1.39
LTBRP36941 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.38□□□□□ -1.39
LTBRP36941 VTA1P1-201ENST00000414044 866 ntBASIC6.38□□□□□ -1.39
LTBRP36941 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC6.38□□□□□ -1.39
LTBRP36941 MTCO1P21-201ENST00000416634 589 ntBASIC6.38□□□□□ -1.39
LTBRP36941 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.38□□□□□ -1.39
LTBRP36941 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.38□□□□□ -1.39
LTBRP36941 AC027644.1-201ENST00000419595 298 ntBASIC6.38□□□□□ -1.39
LTBRP36941 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
LTBRP36941 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC6.38□□□□□ -1.39
LTBRP36941 IFNNP1-201ENST00000429219 553 ntBASIC6.38□□□□□ -1.39
LTBRP36941 YWHAEP5-201ENST00000431545 765 ntBASIC6.38□□□□□ -1.39
LTBRP36941 AC129850.1-201ENST00000436203 508 ntBASIC6.38□□□□□ -1.39
LTBRP36941 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC6.38□□□□□ -1.39
LTBRP36941 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC6.38□□□□□ -1.39
LTBRP36941 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC6.38□□□□□ -1.39
LTBRP36941 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC6.38□□□□□ -1.39
LTBRP36941 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC6.38□□□□□ -1.39
LTBRP36941 AC105420.1-201ENST00000504389 582 ntBASIC6.38□□□□□ -1.39
LTBRP36941 AF213884.2-201ENST00000510417 903 ntBASIC6.38□□□□□ -1.39
LTBRP36941 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC6.38□□□□□ -1.39
LTBRP36941 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC6.38□□□□□ -1.39
LTBRP36941 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC6.38□□□□□ -1.39
LTBRP36941 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.38□□□□□ -1.39
LTBRP36941 OR11H3P-201ENST00000554547 982 ntBASIC6.38□□□□□ -1.39
LTBRP36941 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.38□□□□□ -1.39
LTBRP36941 ACTR3BP3-201ENST00000565577 979 ntBASIC6.38□□□□□ -1.39
LTBRP36941 MTCO1P40-201ENST00000574371 625 ntBASIC6.38□□□□□ -1.39
LTBRP36941 EIF4A2P1-201ENST00000587313 1063 ntBASIC6.38□□□□□ -1.39
LTBRP36941 IMMP1LP3-201ENST00000604197 224 ntBASIC6.38□□□□□ -1.39
LTBRP36941 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
LTBRP36941 AK6-205ENST00000618980 483 ntTSL 2 BASIC6.38□□□□□ -1.39
LTBRP36941 HOTTIP_3.1-201ENST00000619957 337 ntBASIC6.38□□□□□ -1.39
LTBRP36941 AL359757.1-201ENST00000623176 255 ntBASIC6.38□□□□□ -1.39
LTBRP36941 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.38□□□□□ -1.39
LTBRP36941 SRSF3-202ENST00000373715 4222 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
LTBRP36941 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.38□□□□□ -1.39
LTBRP36941 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC6.38□□□□□ -1.39
LTBRP36941 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.38□□□□□ -1.39
LTBRP36941 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.38□□□□□ -1.39
LTBRP36941 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
LTBRP36941 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
LTBRP36941 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC6.38□□□□□ -1.39
LTBRP36941 TRIM49B-202ENST00000622138 2162 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
LTBRP36941 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
LTBRP36941 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC6.38□□□□□ -1.39
LTBRP36941 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
LTBRP36941 AL596244.1-201ENST00000567068 3779 ntBASIC6.38□□□□□ -1.39
LTBRP36941 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
LTBRP36941 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
LTBRP36941 C1QTNF7-201ENST00000295297 4516 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
LTBRP36941 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
LTBRP36941 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
LTBRP36941 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
LTBRP36941 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC6.37□□□□□ -1.39
LTBRP36941 AC241584.2-201ENST00000637142 2090 ntBASIC6.37□□□□□ -1.39
LTBRP36941 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
LTBRP36941 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.37□□□□□ -1.39
LTBRP36941 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC6.37□□□□□ -1.39
LTBRP36941 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
LTBRP36941 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.37□□□□□ -1.39
LTBRP36941 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
LTBRP36941 Y_RNA.192-201ENST00000363977 102 ntBASIC6.37□□□□□ -1.39
LTBRP36941 RN7SKP124-201ENST00000364730 341 ntBASIC6.37□□□□□ -1.39
LTBRP36941 SNORA43.1-201ENST00000364863 140 ntBASIC6.37□□□□□ -1.39
LTBRP36941 RNU6-244P-201ENST00000391028 104 ntBASIC6.37□□□□□ -1.39
LTBRP36941 AC136624.1-201ENST00000400791 413 ntBASIC6.37□□□□□ -1.39
LTBRP36941 AL445213.1-201ENST00000412589 747 ntBASIC6.37□□□□□ -1.39
LTBRP36941 OR2AT2P-201ENST00000413438 905 ntBASIC6.37□□□□□ -1.39
LTBRP36941 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC6.37□□□□□ -1.39
LTBRP36941 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC6.37□□□□□ -1.39
LTBRP36941 AL034379.1-201ENST00000423216 253 ntBASIC6.37□□□□□ -1.39
LTBRP36941 RPL21P43-201ENST00000425440 472 ntBASIC6.37□□□□□ -1.39
LTBRP36941 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC6.37□□□□□ -1.39
LTBRP36941 TRIM60P9Y-201ENST00000438459 816 ntBASIC6.37□□□□□ -1.39
LTBRP36941 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC6.37□□□□□ -1.39
LTBRP36941 AC002542.1-201ENST00000440683 193 ntBASIC6.37□□□□□ -1.39
LTBRP36941 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC6.37□□□□□ -1.39
LTBRP36941 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC6.37□□□□□ -1.39
LTBRP36941 TRIM60P11Y-201ENST00000445313 801 ntBASIC6.37□□□□□ -1.39
LTBRP36941 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.37□□□□□ -1.39
LTBRP36941 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC6.37□□□□□ -1.39
LTBRP36941 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC6.37□□□□□ -1.39
LTBRP36941 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 132.1 ms