Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AMZ2P2-201ENST00000406819 1057 ntBASIC7.79□□□□□ -1.16
RXRBP28702 GAPDHP42-201ENST00000406848 981 ntBASIC7.79□□□□□ -1.16
RXRBP28702 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC7.79□□□□□ -1.16
RXRBP28702 AL390774.1-201ENST00000411924 246 ntBASIC7.79□□□□□ -1.16
RXRBP28702 AL606495.1-201ENST00000422100 813 ntBASIC7.79□□□□□ -1.16
RXRBP28702 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RXRBP28702 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC7.79□□□□□ -1.16
RXRBP28702 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC7.79□□□□□ -1.16
RXRBP28702 RPS7P3-201ENST00000443360 580 ntBASIC7.79□□□□□ -1.16
RXRBP28702 AC044797.1-201ENST00000445744 679 ntBASIC7.79□□□□□ -1.16
RXRBP28702 EXTL2P1-201ENST00000446218 416 ntBASIC7.79□□□□□ -1.16
RXRBP28702 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
RXRBP28702 AC239367.2-201ENST00000447309 705 ntBASIC7.79□□□□□ -1.16
RXRBP28702 AC073072.2-201ENST00000447425 348 ntBASIC7.79□□□□□ -1.16
RXRBP28702 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
RXRBP28702 RPL21P18-201ENST00000469899 480 ntBASIC7.79□□□□□ -1.16
RXRBP28702 AC093663.2-201ENST00000484625 313 ntBASIC7.79□□□□□ -1.16
RXRBP28702 F11-205ENST00000492972 1204 ntTSL 2 BASIC7.79□□□□□ -1.16
RXRBP28702 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC7.79□□□□□ -1.16
RXRBP28702 UBE2Q2P10-201ENST00000514854 900 ntBASIC7.79□□□□□ -1.16
RXRBP28702 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RXRBP28702 LINC01493-201ENST00000530102 460 ntTSL 5 BASIC7.79□□□□□ -1.16
RXRBP28702 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC7.79□□□□□ -1.16
RXRBP28702 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC7.79□□□□□ -1.16
RXRBP28702 EIF1P5-201ENST00000585002 234 ntBASIC7.79□□□□□ -1.16
RXRBP28702 AC087783.2-201ENST00000605070 562 ntBASIC7.79□□□□□ -1.16
RXRBP28702 OR2AS2P-201ENST00000606902 342 ntBASIC7.79□□□□□ -1.16
RXRBP28702 AL139099.4-201ENST00000614802 114 ntBASIC7.79□□□□□ -1.16
RXRBP28702 AC093875.1-201ENST00000623688 504 ntBASIC7.79□□□□□ -1.16
RXRBP28702 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC7.79□□□□□ -1.16
RXRBP28702 METTL8-218ENST00000638989 876 ntTSL 5 BASIC7.79□□□□□ -1.16
RXRBP28702 METTL8-219ENST00000640734 726 ntTSL 2 BASIC7.79□□□□□ -1.16
RXRBP28702 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RXRBP28702 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC7.79□□□□□ -1.16
RXRBP28702 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
RXRBP28702 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RXRBP28702 GARNL3-205ENST00000435213 3599 ntTSL 2 BASIC7.79□□□□□ -1.16
RXRBP28702 SENP1-201ENST00000448372 4679 ntAPPRIS P2 TSL 1 (best) BASIC7.79□□□□□ -1.16
RXRBP28702 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
RXRBP28702 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RXRBP28702 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RXRBP28702 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RXRBP28702 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
RXRBP28702 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RXRBP28702 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RXRBP28702 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RXRBP28702 ZNF736P9Y-201ENST00000439586 1345 ntBASIC7.78□□□□□ -1.16
RXRBP28702 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RXRBP28702 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
RXRBP28702 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RXRBP28702 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RXRBP28702 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
RXRBP28702 TCF7L2-220ENST00000543371 4037 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RXRBP28702 TLR10-202ENST00000361424 3484 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RXRBP28702 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RXRBP28702 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RXRBP28702 RNA5SP487-201ENST00000410186 122 ntBASIC7.78□□□□□ -1.16
RXRBP28702 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC7.78□□□□□ -1.16
RXRBP28702 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC7.78□□□□□ -1.16
RXRBP28702 CYP4F29P-201ENST00000420685 446 ntBASIC7.78□□□□□ -1.16
RXRBP28702 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC7.78□□□□□ -1.16
RXRBP28702 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC7.78□□□□□ -1.16
RXRBP28702 USP9YP9-201ENST00000429406 715 ntBASIC7.78□□□□□ -1.16
RXRBP28702 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC7.78□□□□□ -1.16
RXRBP28702 AL663074.2-201ENST00000440621 479 ntBASIC7.78□□□□□ -1.16
RXRBP28702 RPS27AP8-201ENST00000452665 445 ntBASIC7.78□□□□□ -1.16
RXRBP28702 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC7.78□□□□□ -1.16
RXRBP28702 NDUFA12P1-201ENST00000455914 406 ntBASIC7.78□□□□□ -1.16
RXRBP28702 AC111000.2-201ENST00000507775 550 ntBASIC7.78□□□□□ -1.16
RXRBP28702 AC108157.1-201ENST00000510511 539 ntBASIC7.78□□□□□ -1.16
RXRBP28702 MTCO2P15-201ENST00000532655 656 ntBASIC7.78□□□□□ -1.16
RXRBP28702 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC7.78□□□□□ -1.16
RXRBP28702 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC7.78□□□□□ -1.16
RXRBP28702 DPRXP4-201ENST00000578053 568 ntBASIC7.78□□□□□ -1.16
RXRBP28702 AC234771.5-201ENST00000600161 514 ntBASIC7.78□□□□□ -1.16
RXRBP28702 AC005084.1-201ENST00000605160 304 ntBASIC7.78□□□□□ -1.16
RXRBP28702 AC093673.2-201ENST00000609674 331 ntBASIC7.78□□□□□ -1.16
RXRBP28702 AL356752.1-201ENST00000615844 593 ntBASIC7.78□□□□□ -1.16
RXRBP28702 AL137067.2-201ENST00000621202 131 ntBASIC7.78□□□□□ -1.16
RXRBP28702 AC131159.1-201ENST00000621854 213 ntBASIC7.78□□□□□ -1.16
RXRBP28702 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC7.78□□□□□ -1.16
RXRBP28702 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC7.78□□□□□ -1.16
RXRBP28702 LINC01197-205ENST00000614853 1774 ntTSL 3 BASIC7.78□□□□□ -1.16
RXRBP28702 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC7.78□□□□□ -1.16
RXRBP28702 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
RXRBP28702 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC7.78□□□□□ -1.16
RXRBP28702 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
RXRBP28702 CLCN3-202ENST00000360642 3208 ntTSL 2 BASIC7.78□□□□□ -1.16
RXRBP28702 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RXRBP28702 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC7.78□□□□□ -1.16
RXRBP28702 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RXRBP28702 AC011503.2-201ENST00000594230 1500 ntBASIC7.78□□□□□ -1.16
RXRBP28702 ALB-219ENST00000621085 1418 ntTSL 5 BASIC7.78□□□□□ -1.16
RXRBP28702 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RXRBP28702 AC119674.1-204ENST00000641348 1343 ntBASIC7.78□□□□□ -1.16
RXRBP28702 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC7.77□□□□□ -1.16
RXRBP28702 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC7.77□□□□□ -1.17
RXRBP28702 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RXRBP28702 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
RXRBP28702 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms