Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
ABCD3P28288 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.37□□□□□ -1.55
ABCD3P28288 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
ABCD3P28288 AC092079.1-201ENST00000558620 1985 ntBASIC5.36□□□□□ -1.55
ABCD3P28288 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ABCD3P28288 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ABCD3P28288 AP004607.3-201ENST00000530354 3915 ntBASIC5.36□□□□□ -1.55
ABCD3P28288 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.36□□□□□ -1.55
ABCD3P28288 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ABCD3P28288 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.36□□□□□ -1.55
ABCD3P28288 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.36□□□□□ -1.55
ABCD3P28288 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ABCD3P28288 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ABCD3P28288 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
ABCD3P28288 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ABCD3P28288 RNU6-1005P-201ENST00000384519 107 ntBASIC5.36□□□□□ -1.55
ABCD3P28288 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.36□□□□□ -1.55
ABCD3P28288 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.36□□□□□ -1.55
ABCD3P28288 AC069282.1-201ENST00000411911 526 ntBASIC5.36□□□□□ -1.55
ABCD3P28288 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.36□□□□□ -1.55
ABCD3P28288 IPPKP1-201ENST00000422501 768 ntBASIC5.36□□□□□ -1.55
ABCD3P28288 AC113412.1-201ENST00000425840 504 ntBASIC5.36□□□□□ -1.55
ABCD3P28288 AC079807.1-201ENST00000429993 481 ntBASIC5.36□□□□□ -1.55
ABCD3P28288 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.36□□□□□ -1.55
ABCD3P28288 AL096829.2-201ENST00000446582 742 ntBASIC5.36□□□□□ -1.55
ABCD3P28288 NPM1P39-201ENST00000449818 867 ntBASIC5.36□□□□□ -1.55
ABCD3P28288 AC144530.1-201ENST00000452862 555 ntBASIC5.36□□□□□ -1.55
ABCD3P28288 AC004129.2-201ENST00000457229 287 ntBASIC5.36□□□□□ -1.55
ABCD3P28288 AC090602.1-201ENST00000469695 252 ntBASIC5.36□□□□□ -1.55
ABCD3P28288 CBX1P5-201ENST00000475330 559 ntBASIC5.36□□□□□ -1.55
ABCD3P28288 AC006539.1-201ENST00000481419 501 ntBASIC5.36□□□□□ -1.55
ABCD3P28288 RPS27AP16-201ENST00000492222 470 ntBASIC5.36□□□□□ -1.55
ABCD3P28288 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC5.36□□□□□ -1.55
ABCD3P28288 AC111193.1-201ENST00000504097 155 ntBASIC5.36□□□□□ -1.55
ABCD3P28288 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.36□□□□□ -1.55
ABCD3P28288 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ABCD3P28288 AC011411.1-201ENST00000509592 876 ntBASIC5.36□□□□□ -1.55
ABCD3P28288 AC026782.2-201ENST00000510845 636 ntBASIC5.36□□□□□ -1.55
ABCD3P28288 snoU109.5-201ENST00000516231 132 ntBASIC5.36□□□□□ -1.55
ABCD3P28288 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC5.36□□□□□ -1.55
ABCD3P28288 IGKV2-4-201ENST00000523070 340 ntBASIC5.36□□□□□ -1.55
ABCD3P28288 IGLV3-30-201ENST00000524362 298 ntBASIC5.36□□□□□ -1.55
ABCD3P28288 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC5.36□□□□□ -1.55
ABCD3P28288 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ABCD3P28288 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ABCD3P28288 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.36□□□□□ -1.55
ABCD3P28288 AC122134.1-202ENST00000569111 1201 ntBASIC5.36□□□□□ -1.55
ABCD3P28288 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.36□□□□□ -1.55
ABCD3P28288 MIR4260-201ENST00000583107 67 ntBASIC5.36□□□□□ -1.55
ABCD3P28288 AP001267.4-201ENST00000602598 545 ntBASIC5.36□□□□□ -1.55
ABCD3P28288 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.36□□□□□ -1.55
ABCD3P28288 RNA5SP439-201ENST00000617595 124 ntBASIC5.36□□□□□ -1.55
ABCD3P28288 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.36□□□□□ -1.55
ABCD3P28288 MTCO1P18-201ENST00000455518 1419 ntBASIC5.36□□□□□ -1.55
ABCD3P28288 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.36□□□□□ -1.55
ABCD3P28288 TMEM161BP1-201ENST00000457388 1457 ntBASIC5.36□□□□□ -1.55
ABCD3P28288 AC091305.2-201ENST00000624049 1576 ntBASIC5.36□□□□□ -1.55
ABCD3P28288 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
ABCD3P28288 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
ABCD3P28288 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.36□□□□□ -1.55
ABCD3P28288 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
ABCD3P28288 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
ABCD3P28288 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.36□□□□□ -1.55
ABCD3P28288 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
ABCD3P28288 AL137141.1-201ENST00000624622 4836 ntBASIC5.36□□□□□ -1.55
ABCD3P28288 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ABCD3P28288 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.35□□□□□ -1.55
ABCD3P28288 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
ABCD3P28288 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
ABCD3P28288 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.35□□□□□ -1.55
ABCD3P28288 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ABCD3P28288 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC5.35□□□□□ -1.55
ABCD3P28288 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ABCD3P28288 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.35□□□□□ -1.55
ABCD3P28288 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.35□□□□□ -1.55
ABCD3P28288 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ABCD3P28288 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ABCD3P28288 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.35□□□□□ -1.55
ABCD3P28288 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
ABCD3P28288 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.35□□□□□ -1.55
ABCD3P28288 MTND4P9-201ENST00000507819 1346 ntBASIC5.35□□□□□ -1.55
ABCD3P28288 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
ABCD3P28288 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
ABCD3P28288 SNORA62.2-201ENST00000364672 152 ntBASIC5.35□□□□□ -1.55
ABCD3P28288 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
ABCD3P28288 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
ABCD3P28288 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
ABCD3P28288 PEX12P1-201ENST00000400284 1048 ntBASIC5.35□□□□□ -1.55
ABCD3P28288 AL355143.1-201ENST00000407101 841 ntBASIC5.35□□□□□ -1.55
ABCD3P28288 RPS3AP2-201ENST00000407190 754 ntBASIC5.35□□□□□ -1.55
ABCD3P28288 AL354868.1-201ENST00000417077 482 ntBASIC5.35□□□□□ -1.55
ABCD3P28288 AC092651.1-201ENST00000426110 312 ntBASIC5.35□□□□□ -1.55
ABCD3P28288 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC5.35□□□□□ -1.55
ABCD3P28288 AC093422.3-201ENST00000428506 305 ntBASIC5.35□□□□□ -1.55
ABCD3P28288 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.35□□□□□ -1.55
ABCD3P28288 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.35□□□□□ -1.55
ABCD3P28288 ETF1P3-201ENST00000430422 1160 ntBASIC5.35□□□□□ -1.55
ABCD3P28288 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.35□□□□□ -1.55
ABCD3P28288 RNF2P1-201ENST00000442955 1010 ntBASIC5.35□□□□□ -1.55
ABCD3P28288 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC5.35□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms