Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 LINC00261-202ENST00000564492 4912 ntTSL 3 BASIC6.58□□□□□ -1.36
COL8A1P27658 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.58□□□□□ -1.36
COL8A1P27658 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL8A1P27658 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
COL8A1P27658 NAA40-202ENST00000377793 3664 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL8A1P27658 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL8A1P27658 ZNF90-201ENST00000418063 2310 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL8A1P27658 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL8A1P27658 EIF4G2-202ENST00000396525 3346 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
COL8A1P27658 GNG3-201ENST00000294117 882 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL8A1P27658 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL8A1P27658 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
COL8A1P27658 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL8A1P27658 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC6.58□□□□□ -1.36
COL8A1P27658 SNORA70I-201ENST00000384544 135 ntBASIC6.58□□□□□ -1.36
COL8A1P27658 AL162578.1-201ENST00000406202 378 ntBASIC6.58□□□□□ -1.36
COL8A1P27658 NPM1P40-201ENST00000412758 733 ntBASIC6.58□□□□□ -1.36
COL8A1P27658 CCDC148-AS1-201ENST00000412781 795 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL8A1P27658 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC6.58□□□□□ -1.36
COL8A1P27658 RPL5P6-201ENST00000425640 886 ntBASIC6.58□□□□□ -1.36
COL8A1P27658 AL445669.1-201ENST00000426743 755 ntBASIC6.58□□□□□ -1.36
COL8A1P27658 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.58□□□□□ -1.36
COL8A1P27658 LYPLA1P1-201ENST00000434514 622 ntBASIC6.58□□□□□ -1.36
COL8A1P27658 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC6.58□□□□□ -1.36
COL8A1P27658 HMGB1P18-201ENST00000438801 619 ntBASIC6.58□□□□□ -1.36
COL8A1P27658 AC234771.4-201ENST00000441416 730 ntBASIC6.58□□□□□ -1.36
COL8A1P27658 AC010240.2-201ENST00000445363 1205 ntBASIC6.58□□□□□ -1.36
COL8A1P27658 AL451074.4-201ENST00000447545 470 ntBASIC6.58□□□□□ -1.36
COL8A1P27658 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.58□□□□□ -1.36
COL8A1P27658 SETP14-201ENST00000497538 873 ntBASIC6.58□□□□□ -1.36
COL8A1P27658 AC002456.2-201ENST00000509356 380 ntBASIC6.58□□□□□ -1.36
COL8A1P27658 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC6.58□□□□□ -1.36
COL8A1P27658 AC095059.2-201ENST00000510601 933 ntBASIC6.58□□□□□ -1.36
COL8A1P27658 AC021001.1-201ENST00000518703 987 ntBASIC6.58□□□□□ -1.36
COL8A1P27658 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL8A1P27658 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC6.58□□□□□ -1.36
COL8A1P27658 NIFKP8-201ENST00000560500 874 ntBASIC6.58□□□□□ -1.36
COL8A1P27658 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
COL8A1P27658 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC6.58□□□□□ -1.36
COL8A1P27658 DYNLL1P1-201ENST00000595442 269 ntBASIC6.58□□□□□ -1.36
COL8A1P27658 AC036176.3-201ENST00000602456 418 ntBASIC6.58□□□□□ -1.36
COL8A1P27658 AC023513.1-201ENST00000604396 691 ntBASIC6.58□□□□□ -1.36
COL8A1P27658 AL499605.1-201ENST00000604628 403 ntBASIC6.58□□□□□ -1.36
COL8A1P27658 AC092960.1-201ENST00000604762 351 ntBASIC6.58□□□□□ -1.36
COL8A1P27658 MIR6862-1-201ENST00000613016 70 ntBASIC6.58□□□□□ -1.36
COL8A1P27658 MIR6862-2-201ENST00000614755 70 ntBASIC6.58□□□□□ -1.36
COL8A1P27658 MIR6729-201ENST00000618194 65 ntBASIC6.58□□□□□ -1.36
COL8A1P27658 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC6.58□□□□□ -1.36
COL8A1P27658 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC6.58□□□□□ -1.36
COL8A1P27658 GBP7-201ENST00000294671 2454 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
COL8A1P27658 ZNF415-214ENST00000597748 2461 ntTSL 5 BASIC6.58□□□□□ -1.36
COL8A1P27658 GTF2H3-201ENST00000228955 1472 ntTSL 2 BASIC6.58□□□□□ -1.36
COL8A1P27658 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC6.58□□□□□ -1.36
COL8A1P27658 NUDT13-203ENST00000372997 1919 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
COL8A1P27658 CLCN3P1-202ENST00000609203 1944 ntTSL 2 BASIC6.58□□□□□ -1.36
COL8A1P27658 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
COL8A1P27658 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC6.58□□□□□ -1.36
COL8A1P27658 LINC00683-202ENST00000579781 3510 ntTSL 2 BASIC6.58□□□□□ -1.36
COL8A1P27658 ALG13-201ENST00000251943 3997 ntTSL 2 BASIC6.58□□□□□ -1.36
COL8A1P27658 AC073349.2-201ENST00000427545 1603 ntBASIC6.58□□□□□ -1.36
COL8A1P27658 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL8A1P27658 PTPRT-211ENST00000618610 3230 ntTSL 5 BASIC6.57□□□□□ -1.36
COL8A1P27658 AGBL1-205ENST00000635782 3201 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
COL8A1P27658 AC016582.1-202ENST00000636341 2982 ntBASIC6.57□□□□□ -1.36
COL8A1P27658 AC015871.4-201ENST00000624650 2260 ntBASIC6.57□□□□□ -1.36
COL8A1P27658 GAPVD1-204ENST00000394083 4747 ntTSL 5 BASIC6.57□□□□□ -1.36
COL8A1P27658 CKAP2P1-201ENST00000555477 2049 ntBASIC6.57□□□□□ -1.36
COL8A1P27658 AC087045.3-201ENST00000623046 2468 ntBASIC6.57□□□□□ -1.36
COL8A1P27658 NEDD1-201ENST00000266742 4046 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
COL8A1P27658 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL8A1P27658 AL109811.1-201ENST00000452378 2682 ntTSL 2 BASIC6.57□□□□□ -1.36
COL8A1P27658 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL8A1P27658 KIAA0753-201ENST00000361413 4859 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL8A1P27658 ADAMTS9-201ENST00000295903 7060 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL8A1P27658 AC109780.1-201ENST00000451768 1344 ntBASIC6.57□□□□□ -1.36
COL8A1P27658 PBLD-203ENST00000336578 2449 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL8A1P27658 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
COL8A1P27658 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL8A1P27658 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL8A1P27658 CAMK2D-214ENST00000515496 1533 ntTSL 5 BASIC6.57□□□□□ -1.36
COL8A1P27658 PPP2R3A-202ENST00000334546 2196 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL8A1P27658 PIWIL2-204ENST00000521356 3488 ntTSL 2 BASIC6.57□□□□□ -1.36
COL8A1P27658 MYO1A-203ENST00000442789 3658 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
COL8A1P27658 AL109918.1-201ENST00000602367 3039 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
COL8A1P27658 AC005294.1-201ENST00000355509 281 ntBASIC6.57□□□□□ -1.36
COL8A1P27658 PARD3-204ENST00000374768 799 ntTSL 3 BASIC6.57□□□□□ -1.36
COL8A1P27658 RNU6-74P-201ENST00000384235 107 ntBASIC6.57□□□□□ -1.36
COL8A1P27658 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
COL8A1P27658 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC6.57□□□□□ -1.36
COL8A1P27658 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.57□□□□□ -1.36
COL8A1P27658 AL359704.1-201ENST00000411586 781 ntBASIC6.57□□□□□ -1.36
COL8A1P27658 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC6.57□□□□□ -1.36
COL8A1P27658 GAPDHP51-201ENST00000426454 1000 ntBASIC6.57□□□□□ -1.36
COL8A1P27658 DSTNP5-201ENST00000427921 523 ntBASIC6.57□□□□□ -1.36
COL8A1P27658 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC6.57□□□□□ -1.36
COL8A1P27658 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.57□□□□□ -1.36
COL8A1P27658 AC097527.1-201ENST00000437031 530 ntBASIC6.57□□□□□ -1.36
COL8A1P27658 MTND6P13-201ENST00000443510 523 ntBASIC6.57□□□□□ -1.36
COL8A1P27658 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC6.57□□□□□ -1.36
COL8A1P27658 AC099670.1-201ENST00000455141 783 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms