Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 AC083864.2-201ENST00000446024 482 ntTSL 3 BASIC8.67□□□□□ -1.02
PTPREP23469 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC8.67□□□□□ -1.02
PTPREP23469 CACYBPP2-201ENST00000453625 678 ntBASIC8.67□□□□□ -1.02
PTPREP23469 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC8.67□□□□□ -1.02
PTPREP23469 RNU7-157P-201ENST00000459600 66 ntBASIC8.67□□□□□ -1.02
PTPREP23469 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
PTPREP23469 RPSAP24-201ENST00000461543 873 ntBASIC8.67□□□□□ -1.02
PTPREP23469 RPL12P40-201ENST00000467028 488 ntBASIC8.67□□□□□ -1.02
PTPREP23469 AL135752.1-201ENST00000479477 471 ntBASIC8.67□□□□□ -1.02
PTPREP23469 RPL7P38-201ENST00000488396 739 ntBASIC8.67□□□□□ -1.02
PTPREP23469 C7orf73-202ENST00000507606 2450 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
PTPREP23469 AC005741.1-201ENST00000511094 432 ntBASIC8.67□□□□□ -1.02
PTPREP23469 RNY4P37-201ENST00000516225 96 ntBASIC8.67□□□□□ -1.02
PTPREP23469 RNU6-406P-201ENST00000516470 107 ntBASIC8.67□□□□□ -1.02
PTPREP23469 Y_RNA.691-201ENST00000516611 103 ntBASIC8.67□□□□□ -1.02
PTPREP23469 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC8.67□□□□□ -1.02
PTPREP23469 AC107953.1-201ENST00000522216 297 ntBASIC8.67□□□□□ -1.02
PTPREP23469 FXYD2-206ENST00000532119 562 ntAPPRIS P1 TSL 3 BASIC8.67□□□□□ -1.02
PTPREP23469 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC8.67□□□□□ -1.02
PTPREP23469 AC084782.1-201ENST00000564401 2465 ntBASIC8.67□□□□□ -1.02
PTPREP23469 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC8.67□□□□□ -1.02
PTPREP23469 AC092142.1-202ENST00000567021 829 ntTSL 5 BASIC8.67□□□□□ -1.02
PTPREP23469 AC055876.1-202ENST00000567053 138 ntBASIC8.67□□□□□ -1.02
PTPREP23469 RBM22P12-201ENST00000567098 1255 ntBASIC8.67□□□□□ -1.02
PTPREP23469 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC8.67□□□□□ -1.02
PTPREP23469 ARGFXP2-201ENST00000579304 949 ntBASIC8.67□□□□□ -1.02
PTPREP23469 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC8.67□□□□□ -1.02
PTPREP23469 AC125494.2-201ENST00000602431 657 ntBASIC8.67□□□□□ -1.02
PTPREP23469 AL096855.2-201ENST00000605785 369 ntBASIC8.67□□□□□ -1.02
PTPREP23469 CUX2P1-201ENST00000606426 298 ntBASIC8.67□□□□□ -1.02
PTPREP23469 AC011816.2-201ENST00000607089 556 ntBASIC8.67□□□□□ -1.02
PTPREP23469 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC8.67□□□□□ -1.02
PTPREP23469 AC211486.5-201ENST00000616609 775 ntTSL 3 BASIC8.67□□□□□ -1.02
PTPREP23469 CNTNAP3P1-201ENST00000616657 906 ntBASIC8.67□□□□□ -1.02
PTPREP23469 AC006840.1-201ENST00000623069 542 ntBASIC8.67□□□□□ -1.02
PTPREP23469 AC138649.5-201ENST00000637456 137 ntBASIC8.67□□□□□ -1.02
PTPREP23469 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
PTPREP23469 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
PTPREP23469 PHF6-202ENST00000370799 4186 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
PTPREP23469 AC135012.3-201ENST00000599841 4039 ntTSL 4 BASIC8.67□□□□□ -1.02
PTPREP23469 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC8.67□□□□□ -1.02
PTPREP23469 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
PTPREP23469 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC8.66□□□□□ -1.02
PTPREP23469 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
PTPREP23469 ITPK1-AS1-201ENST00000553639 4701 ntBASIC8.66□□□□□ -1.02
PTPREP23469 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
PTPREP23469 CKAP2P1-201ENST00000555477 2049 ntBASIC8.66□□□□□ -1.02
PTPREP23469 CRISPLD1-202ENST00000517786 1964 ntTSL 2 BASIC8.66□□□□□ -1.02
PTPREP23469 AC090983.1-201ENST00000623426 3897 ntBASIC8.66□□□□□ -1.02
PTPREP23469 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC8.66□□□□□ -1.02
PTPREP23469 RRM2-213ENST00000641198 3431 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
PTPREP23469 RHOJ-201ENST00000316754 3302 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
PTPREP23469 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC8.66□□□□□ -1.02
PTPREP23469 AC024560.2-201ENST00000507981 1497 ntBASIC8.66□□□□□ -1.02
PTPREP23469 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC8.66□□□□□ -1.02
PTPREP23469 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC8.66□□□□□ -1.02
PTPREP23469 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC8.66□□□□□ -1.02
PTPREP23469 AC023886.2-201ENST00000321285 411 ntBASIC8.66□□□□□ -1.02
PTPREP23469 RNU6-74P-201ENST00000384235 107 ntBASIC8.66□□□□□ -1.02
PTPREP23469 U8.14-201ENST00000390843 143 ntBASIC8.66□□□□□ -1.02
PTPREP23469 MIR548I3-201ENST00000408378 149 ntBASIC8.66□□□□□ -1.02
PTPREP23469 MIR548I1-201ENST00000408810 149 ntBASIC8.66□□□□□ -1.02
PTPREP23469 MTND3P8-201ENST00000412909 339 ntBASIC8.66□□□□□ -1.02
PTPREP23469 MTCO2P27-201ENST00000420740 428 ntBASIC8.66□□□□□ -1.02
PTPREP23469 DSTNP5-201ENST00000427921 523 ntBASIC8.66□□□□□ -1.02
PTPREP23469 AC097468.2-201ENST00000429343 553 ntTSL 4 BASIC8.66□□□□□ -1.02
PTPREP23469 RPL14P5-201ENST00000436474 730 ntBASIC8.66□□□□□ -1.02
PTPREP23469 HMGB1P18-201ENST00000438801 619 ntBASIC8.66□□□□□ -1.02
PTPREP23469 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
PTPREP23469 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC8.66□□□□□ -1.02
PTPREP23469 OR51P1P-201ENST00000447547 942 ntBASIC8.66□□□□□ -1.02
PTPREP23469 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC8.66□□□□□ -1.02
PTPREP23469 RPLP0P1-201ENST00000457002 361 ntBASIC8.66□□□□□ -1.02
PTPREP23469 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC8.66□□□□□ -1.02
PTPREP23469 AC096922.1-201ENST00000461635 651 ntBASIC8.66□□□□□ -1.02
PTPREP23469 TDGF1P6-201ENST00000463873 448 ntBASIC8.66□□□□□ -1.02
PTPREP23469 RN7SL233P-201ENST00000469988 277 ntBASIC8.66□□□□□ -1.02
PTPREP23469 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC8.66□□□□□ -1.02
PTPREP23469 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC8.66□□□□□ -1.02
PTPREP23469 RPL21P42-201ENST00000488408 464 ntBASIC8.66□□□□□ -1.02
PTPREP23469 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC8.66□□□□□ -1.02
PTPREP23469 RPL7L1P7-201ENST00000509986 724 ntBASIC8.66□□□□□ -1.02
PTPREP23469 RPL7L1P13-201ENST00000511702 739 ntBASIC8.66□□□□□ -1.02
PTPREP23469 KCTD9P2-201ENST00000512203 1013 ntBASIC8.66□□□□□ -1.02
PTPREP23469 AC022296.2-201ENST00000512424 202 ntBASIC8.66□□□□□ -1.02
PTPREP23469 RN7SKP40-201ENST00000517211 242 ntBASIC8.66□□□□□ -1.02
PTPREP23469 CASC19-203ENST00000523510 575 ntTSL 3 BASIC8.66□□□□□ -1.02
PTPREP23469 OR5M4P-201ENST00000529436 925 ntBASIC8.66□□□□□ -1.02
PTPREP23469 OR6M3P-201ENST00000531567 700 ntBASIC8.66□□□□□ -1.02
PTPREP23469 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC8.66□□□□□ -1.02
PTPREP23469 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC8.66□□□□□ -1.02
PTPREP23469 RPL21P5-201ENST00000554662 472 ntBASIC8.66□□□□□ -1.02
PTPREP23469 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC8.66□□□□□ -1.02
PTPREP23469 MIR3682-201ENST00000581338 84 ntBASIC8.66□□□□□ -1.02
PTPREP23469 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC8.66□□□□□ -1.02
PTPREP23469 AC061975.3-201ENST00000583209 244 ntBASIC8.66□□□□□ -1.02
PTPREP23469 AL627309.6-201ENST00000606857 840 ntBASIC8.66□□□□□ -1.02
PTPREP23469 AC011815.3-201ENST00000624194 473 ntBASIC8.66□□□□□ -1.02
PTPREP23469 CYP2C8-213ENST00000628935 924 ntTSL 5 BASIC8.66□□□□□ -1.02
PTPREP23469 CLUHP10-201ENST00000631979 980 ntBASIC8.66□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 152.4 ms