Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 CA1-222ENST00000523953 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
ERCC3P19447 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
ERCC3P19447 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC7.48□□□□□ -1.21
ERCC3P19447 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC7.48□□□□□ -1.21
ERCC3P19447 AC090115.2-201ENST00000548060 883 ntBASIC7.48□□□□□ -1.21
ERCC3P19447 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC7.48□□□□□ -1.21
ERCC3P19447 AC023394.2-201ENST00000581987 792 ntTSL 5 BASIC7.48□□□□□ -1.21
ERCC3P19447 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC7.48□□□□□ -1.21
ERCC3P19447 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC7.48□□□□□ -1.21
ERCC3P19447 VN1R88P-201ENST00000596787 292 ntBASIC7.48□□□□□ -1.21
ERCC3P19447 AC105129.3-201ENST00000605455 485 ntBASIC7.48□□□□□ -1.21
ERCC3P19447 AL031601.1-201ENST00000605702 394 ntBASIC7.48□□□□□ -1.21
ERCC3P19447 AL136097.3-201ENST00000611097 505 ntBASIC7.48□□□□□ -1.21
ERCC3P19447 MIR6085-201ENST00000618314 110 ntBASIC7.48□□□□□ -1.21
ERCC3P19447 AL354718.1-201ENST00000619764 589 ntBASIC7.48□□□□□ -1.21
ERCC3P19447 AC131009.3-201ENST00000621809 287 ntBASIC7.48□□□□□ -1.21
ERCC3P19447 AL359757.1-201ENST00000623176 255 ntBASIC7.48□□□□□ -1.21
ERCC3P19447 AC073530.2-201ENST00000623987 261 ntBASIC7.48□□□□□ -1.21
ERCC3P19447 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC7.48□□□□□ -1.21
ERCC3P19447 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
ERCC3P19447 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC7.48□□□□□ -1.21
ERCC3P19447 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC7.48□□□□□ -1.21
ERCC3P19447 RNF6P1-201ENST00000444889 1784 ntBASIC7.48□□□□□ -1.21
ERCC3P19447 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
ERCC3P19447 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
ERCC3P19447 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
ERCC3P19447 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC7.48□□□□□ -1.21
ERCC3P19447 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC7.47□□□□□ -1.21
ERCC3P19447 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
ERCC3P19447 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
ERCC3P19447 AC105114.1-201ENST00000624795 1862 ntBASIC7.47□□□□□ -1.21
ERCC3P19447 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
ERCC3P19447 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
ERCC3P19447 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
ERCC3P19447 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
ERCC3P19447 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
ERCC3P19447 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC7.47□□□□□ -1.21
ERCC3P19447 AL049737.1-201ENST00000413920 1403 ntBASIC7.47□□□□□ -1.21
ERCC3P19447 AC093225.1-201ENST00000506867 1408 ntBASIC7.47□□□□□ -1.21
ERCC3P19447 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC7.47□□□□□ -1.21
ERCC3P19447 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
ERCC3P19447 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
ERCC3P19447 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
ERCC3P19447 RNU6-560P-201ENST00000364007 108 ntBASIC7.47□□□□□ -1.21
ERCC3P19447 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
ERCC3P19447 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
ERCC3P19447 AL157702.1-201ENST00000398764 426 ntBASIC7.47□□□□□ -1.21
ERCC3P19447 GSTA8P-201ENST00000404253 637 ntBASIC7.47□□□□□ -1.21
ERCC3P19447 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
ERCC3P19447 AL049697.3-201ENST00000406493 982 ntBASIC7.47□□□□□ -1.21
ERCC3P19447 AL139805.1-201ENST00000407837 289 ntBASIC7.47□□□□□ -1.21
ERCC3P19447 PAICSP7-201ENST00000419829 962 ntBASIC7.47□□□□□ -1.21
ERCC3P19447 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
ERCC3P19447 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC7.47□□□□□ -1.21
ERCC3P19447 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC7.47□□□□□ -1.21
ERCC3P19447 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
ERCC3P19447 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC7.47□□□□□ -1.21
ERCC3P19447 AL445567.1-201ENST00000439121 144 ntBASIC7.47□□□□□ -1.21
ERCC3P19447 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
ERCC3P19447 CXCR2P1-202ENST00000443392 1074 ntBASIC7.47□□□□□ -1.21
ERCC3P19447 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
ERCC3P19447 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC7.47□□□□□ -1.21
ERCC3P19447 BZW1P2-201ENST00000473537 826 ntBASIC7.47□□□□□ -1.21
ERCC3P19447 AC068522.1-201ENST00000482895 345 ntBASIC7.47□□□□□ -1.21
ERCC3P19447 DYNLL1P6-201ENST00000503440 264 ntBASIC7.47□□□□□ -1.21
ERCC3P19447 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC7.47□□□□□ -1.21
ERCC3P19447 IGBP1P5-201ENST00000507524 1000 ntBASIC7.47□□□□□ -1.21
ERCC3P19447 AC111000.2-201ENST00000507775 550 ntBASIC7.47□□□□□ -1.21
ERCC3P19447 AC108471.1-201ENST00000513977 287 ntBASIC7.47□□□□□ -1.21
ERCC3P19447 RNU6-232P-201ENST00000517144 64 ntBASIC7.47□□□□□ -1.21
ERCC3P19447 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC7.47□□□□□ -1.21
ERCC3P19447 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC7.47□□□□□ -1.21
ERCC3P19447 AP001317.1-201ENST00000531194 960 ntBASIC7.47□□□□□ -1.21
ERCC3P19447 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC7.47□□□□□ -1.21
ERCC3P19447 LYZ-203ENST00000549690 669 ntTSL 2 BASIC7.47□□□□□ -1.21
ERCC3P19447 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
ERCC3P19447 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC7.47□□□□□ -1.21
ERCC3P19447 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC7.47□□□□□ -1.21
ERCC3P19447 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
ERCC3P19447 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC7.47□□□□□ -1.21
ERCC3P19447 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC7.47□□□□□ -1.21
ERCC3P19447 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC7.47□□□□□ -1.21
ERCC3P19447 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC7.47□□□□□ -1.21
ERCC3P19447 AC025165.5-201ENST00000602802 578 ntBASIC7.47□□□□□ -1.21
ERCC3P19447 AL138895.2-201ENST00000603019 178 ntBASIC7.47□□□□□ -1.21
ERCC3P19447 AL451086.1-201ENST00000605596 223 ntBASIC7.47□□□□□ -1.21
ERCC3P19447 AC012557.2-201ENST00000605919 418 ntBASIC7.47□□□□□ -1.21
ERCC3P19447 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
ERCC3P19447 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
ERCC3P19447 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC7.47□□□□□ -1.21
ERCC3P19447 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
ERCC3P19447 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC7.47□□□□□ -1.21
ERCC3P19447 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
ERCC3P19447 AC003973.3-201ENST00000624863 2822 ntBASIC7.47□□□□□ -1.21
ERCC3P19447 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
ERCC3P19447 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
ERCC3P19447 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
ERCC3P19447 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
ERCC3P19447 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
ERCC3P19447 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms