Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC4.89□□□□□ -1.63
NCK1P16333 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
NCK1P16333 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
NCK1P16333 OR52B3P-201ENST00000314715 928 ntBASIC4.89□□□□□ -1.63
NCK1P16333 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.89□□□□□ -1.63
NCK1P16333 AL078599.1-201ENST00000402075 293 ntBASIC4.89□□□□□ -1.63
NCK1P16333 HMGN1P20-201ENST00000411849 300 ntBASIC4.89□□□□□ -1.63
NCK1P16333 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.89□□□□□ -1.63
NCK1P16333 CLNS1AP1-201ENST00000435954 682 ntBASIC4.89□□□□□ -1.63
NCK1P16333 RPL12P18-201ENST00000437175 325 ntBASIC4.89□□□□□ -1.63
NCK1P16333 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.89□□□□□ -1.63
NCK1P16333 RPL35AP21-201ENST00000437667 333 ntBASIC4.89□□□□□ -1.63
NCK1P16333 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.89□□□□□ -1.63
NCK1P16333 AC105399.1-202ENST00000447303 205 ntBASIC4.89□□□□□ -1.63
NCK1P16333 MRPL35P2-201ENST00000448009 511 ntBASIC4.89□□□□□ -1.63
NCK1P16333 MTND6P32-201ENST00000457611 483 ntBASIC4.89□□□□□ -1.63
NCK1P16333 AC079168.1-201ENST00000458741 345 ntBASIC4.89□□□□□ -1.63
NCK1P16333 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.89□□□□□ -1.63
NCK1P16333 RN7SL649P-201ENST00000496974 275 ntBASIC4.89□□□□□ -1.63
NCK1P16333 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.89□□□□□ -1.63
NCK1P16333 HMGB3P16-201ENST00000508037 287 ntBASIC4.89□□□□□ -1.63
NCK1P16333 MTCO3P42-201ENST00000509488 518 ntBASIC4.89□□□□□ -1.63
NCK1P16333 APOBEC3AP1-201ENST00000511396 287 ntBASIC4.89□□□□□ -1.63
NCK1P16333 MTCO3P39-201ENST00000514812 518 ntBASIC4.89□□□□□ -1.63
NCK1P16333 AC011853.1-201ENST00000518911 454 ntBASIC4.89□□□□□ -1.63
NCK1P16333 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC4.89□□□□□ -1.63
NCK1P16333 OR8A2P-201ENST00000528631 952 ntBASIC4.89□□□□□ -1.63
NCK1P16333 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
NCK1P16333 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC4.89□□□□□ -1.63
NCK1P16333 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.89□□□□□ -1.63
NCK1P16333 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC4.89□□□□□ -1.63
NCK1P16333 AP001496.3-201ENST00000580230 913 ntBASIC4.89□□□□□ -1.63
NCK1P16333 AC015914.2-201ENST00000618167 288 ntBASIC4.89□□□□□ -1.63
NCK1P16333 TEX41-293ENST00000630451 690 ntTSL 5 BASIC4.89□□□□□ -1.63
NCK1P16333 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
NCK1P16333 MIR193BHG-214ENST00000641765 509 ntBASIC4.89□□□□□ -1.63
NCK1P16333 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
NCK1P16333 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NCK1P16333 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
NCK1P16333 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NCK1P16333 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.89□□□□□ -1.63
NCK1P16333 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
NCK1P16333 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
NCK1P16333 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.89□□□□□ -1.63
NCK1P16333 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
NCK1P16333 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC4.88□□□□□ -1.63
NCK1P16333 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
NCK1P16333 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NCK1P16333 AC019072.1-201ENST00000604535 1551 ntBASIC4.88□□□□□ -1.63
NCK1P16333 AC011447.7-201ENST00000624228 1590 ntBASIC4.88□□□□□ -1.63
NCK1P16333 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NCK1P16333 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NCK1P16333 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NCK1P16333 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.88□□□□□ -1.63
NCK1P16333 MIR105-1-201ENST00000385222 81 ntBASIC4.88□□□□□ -1.63
NCK1P16333 HMGB3P7-201ENST00000400214 611 ntBASIC4.88□□□□□ -1.63
NCK1P16333 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC4.88□□□□□ -1.63
NCK1P16333 GABARAPL3-201ENST00000412799 354 ntBASIC4.88□□□□□ -1.63
NCK1P16333 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4.88□□□□□ -1.63
NCK1P16333 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.88□□□□□ -1.63
NCK1P16333 Z84478.1-201ENST00000438230 1219 ntBASIC4.88□□□□□ -1.63
NCK1P16333 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC4.88□□□□□ -1.63
NCK1P16333 GAPDHP25-201ENST00000447061 1001 ntBASIC4.88□□□□□ -1.63
NCK1P16333 AC118758.1-202ENST00000454719 225 ntBASIC4.88□□□□□ -1.63
NCK1P16333 AC011476.1-201ENST00000466725 307 ntBASIC4.88□□□□□ -1.63
NCK1P16333 RPL9P15-201ENST00000491096 532 ntBASIC4.88□□□□□ -1.63
NCK1P16333 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NCK1P16333 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC4.88□□□□□ -1.63
NCK1P16333 AC006427.1-201ENST00000514359 712 ntBASIC4.88□□□□□ -1.63
NCK1P16333 FTH1P11-201ENST00000517577 551 ntBASIC4.88□□□□□ -1.63
NCK1P16333 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC4.88□□□□□ -1.63
NCK1P16333 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC4.88□□□□□ -1.63
NCK1P16333 TRIM77BP-201ENST00000524985 1119 ntBASIC4.88□□□□□ -1.63
NCK1P16333 BNIP3P1-201ENST00000547295 580 ntBASIC4.88□□□□□ -1.63
NCK1P16333 AC026826.3-201ENST00000561747 158 ntBASIC4.88□□□□□ -1.63
NCK1P16333 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NCK1P16333 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.88□□□□□ -1.63
NCK1P16333 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NCK1P16333 RBM22P1-201ENST00000578589 1214 ntBASIC4.88□□□□□ -1.63
NCK1P16333 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.88□□□□□ -1.63
NCK1P16333 AC060766.1-201ENST00000590824 627 ntBASIC4.88□□□□□ -1.63
NCK1P16333 AC018695.5-201ENST00000605872 315 ntBASIC4.88□□□□□ -1.63
NCK1P16333 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.88□□□□□ -1.63
NCK1P16333 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
NCK1P16333 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC4.88□□□□□ -1.63
NCK1P16333 AC073592.6-201ENST00000624271 415 ntBASIC4.88□□□□□ -1.63
NCK1P16333 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NCK1P16333 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.88□□□□□ -1.63
NCK1P16333 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.88□□□□□ -1.63
NCK1P16333 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.88□□□□□ -1.63
NCK1P16333 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC4.88□□□□□ -1.63
NCK1P16333 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NCK1P16333 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.88□□□□□ -1.63
NCK1P16333 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
NCK1P16333 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NCK1P16333 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NCK1P16333 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
NCK1P16333 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
NCK1P16333 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
NCK1P16333 AC093775.1-201ENST00000624154 1868 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms