Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC090181.3-201ENST00000624777 1514 ntBASIC6.25□□□□□ -1.41
COL6A2P12110 AC092111.2-201ENST00000611627 1414 ntBASIC6.25□□□□□ -1.41
COL6A2P12110 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COL6A2P12110 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC6.25□□□□□ -1.41
COL6A2P12110 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL6A2P12110 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.24□□□□□ -1.41
COL6A2P12110 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
COL6A2P12110 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
COL6A2P12110 AC000367.1-201ENST00000452711 1766 ntBASIC6.24□□□□□ -1.41
COL6A2P12110 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
COL6A2P12110 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL6A2P12110 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.24□□□□□ -1.41
COL6A2P12110 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL6A2P12110 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL6A2P12110 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL6A2P12110 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL6A2P12110 METTL21EP-201ENST00000298105 713 ntBASIC6.24□□□□□ -1.41
COL6A2P12110 SNORD35A-201ENST00000363389 86 ntBASIC6.24□□□□□ -1.41
COL6A2P12110 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC6.24□□□□□ -1.41
COL6A2P12110 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
COL6A2P12110 RPL31-204ENST00000409038 817 ntTSL 2 BASIC6.24□□□□□ -1.41
COL6A2P12110 MOB4-205ENST00000409916 829 ntTSL 3 BASIC6.24□□□□□ -1.41
COL6A2P12110 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC6.24□□□□□ -1.41
COL6A2P12110 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.24□□□□□ -1.41
COL6A2P12110 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.24□□□□□ -1.41
COL6A2P12110 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC6.24□□□□□ -1.41
COL6A2P12110 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC6.24□□□□□ -1.41
COL6A2P12110 PTPN2P1-201ENST00000423212 1072 ntBASIC6.24□□□□□ -1.41
COL6A2P12110 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL6A2P12110 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC6.24□□□□□ -1.41
COL6A2P12110 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL6A2P12110 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL6A2P12110 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC6.24□□□□□ -1.41
COL6A2P12110 AL360221.1-201ENST00000445989 335 ntBASIC6.24□□□□□ -1.41
COL6A2P12110 MORF4-201ENST00000447135 971 ntBASIC6.24□□□□□ -1.41
COL6A2P12110 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC6.24□□□□□ -1.41
COL6A2P12110 AL133480.2-201ENST00000456723 487 ntBASIC6.24□□□□□ -1.41
COL6A2P12110 PSAT1P4-201ENST00000466500 526 ntBASIC6.24□□□□□ -1.41
COL6A2P12110 RPL35AP19-201ENST00000469425 329 ntBASIC6.24□□□□□ -1.41
COL6A2P12110 AC011979.1-201ENST00000472300 483 ntBASIC6.24□□□□□ -1.41
COL6A2P12110 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.24□□□□□ -1.41
COL6A2P12110 OR7E157P-201ENST00000494376 911 ntBASIC6.24□□□□□ -1.41
COL6A2P12110 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC6.24□□□□□ -1.41
COL6A2P12110 RNU6-759P-201ENST00000516740 103 ntBASIC6.24□□□□□ -1.41
COL6A2P12110 RNU6-1308P-201ENST00000516817 103 ntBASIC6.24□□□□□ -1.41
COL6A2P12110 SCARNA11.1-201ENST00000516918 132 ntBASIC6.24□□□□□ -1.41
COL6A2P12110 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC6.24□□□□□ -1.41
COL6A2P12110 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL6A2P12110 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL6A2P12110 CASP1-216ENST00000534497 825 ntTSL 5 BASIC6.24□□□□□ -1.41
COL6A2P12110 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.24□□□□□ -1.41
COL6A2P12110 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.24□□□□□ -1.41
COL6A2P12110 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC6.24□□□□□ -1.41
COL6A2P12110 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.24□□□□□ -1.41
COL6A2P12110 AC027104.1-201ENST00000563702 681 ntBASIC6.24□□□□□ -1.41
COL6A2P12110 SYPL1P2-201ENST00000582878 727 ntBASIC6.24□□□□□ -1.41
COL6A2P12110 AL589863.1-201ENST00000595383 631 ntBASIC6.24□□□□□ -1.41
COL6A2P12110 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.24□□□□□ -1.41
COL6A2P12110 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC6.24□□□□□ -1.41
COL6A2P12110 DEFB131E-202ENST00000602581 683 ntBASIC6.24□□□□□ -1.41
COL6A2P12110 AC010738.1-201ENST00000604970 987 ntBASIC6.24□□□□□ -1.41
COL6A2P12110 ZNF663P-202ENST00000641770 1131 ntBASIC6.24□□□□□ -1.41
COL6A2P12110 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
COL6A2P12110 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.24□□□□□ -1.41
COL6A2P12110 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL6A2P12110 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
COL6A2P12110 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL6A2P12110 KARSP3-201ENST00000571212 1504 ntBASIC6.24□□□□□ -1.41
COL6A2P12110 AL356473.1-201ENST00000406203 1408 ntBASIC6.24□□□□□ -1.41
COL6A2P12110 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.24□□□□□ -1.41
COL6A2P12110 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.24□□□□□ -1.41
COL6A2P12110 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
COL6A2P12110 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
COL6A2P12110 AL355834.1-201ENST00000556602 3965 ntBASIC6.24□□□□□ -1.41
COL6A2P12110 AC009220.2-201ENST00000489759 1751 ntBASIC6.23□□□□□ -1.41
COL6A2P12110 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC6.23□□□□□ -1.41
COL6A2P12110 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.23□□□□□ -1.41
COL6A2P12110 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL6A2P12110 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
COL6A2P12110 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.23□□□□□ -1.41
COL6A2P12110 ECM1P2-201ENST00000503354 1577 ntBASIC6.23□□□□□ -1.41
COL6A2P12110 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
COL6A2P12110 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL6A2P12110 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
COL6A2P12110 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
COL6A2P12110 AC232271.1-201ENST00000602455 2715 ntBASIC6.23□□□□□ -1.41
COL6A2P12110 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
COL6A2P12110 AC005725.1-201ENST00000577346 2607 ntBASIC6.23□□□□□ -1.41
COL6A2P12110 HDAC1P2-201ENST00000453661 1398 ntBASIC6.23□□□□□ -1.41
COL6A2P12110 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
COL6A2P12110 AC010894.1-201ENST00000313760 361 ntBASIC6.23□□□□□ -1.41
COL6A2P12110 RNU1-5P-201ENST00000362684 144 ntBASIC6.23□□□□□ -1.41
COL6A2P12110 snoZ40.1-201ENST00000364540 72 ntBASIC6.23□□□□□ -1.41
COL6A2P12110 RPL12P23-201ENST00000405880 490 ntBASIC6.23□□□□□ -1.41
COL6A2P12110 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC6.23□□□□□ -1.41
COL6A2P12110 DPPA2P2-201ENST00000418220 897 ntBASIC6.23□□□□□ -1.41
COL6A2P12110 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC6.23□□□□□ -1.41
COL6A2P12110 AL672212.1-201ENST00000422246 400 ntBASIC6.23□□□□□ -1.41
COL6A2P12110 HSPE1P16-201ENST00000426640 348 ntBASIC6.23□□□□□ -1.41
COL6A2P12110 AC093716.1-201ENST00000435923 377 ntBASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms