Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
TPM1P09493 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
TPM1P09493 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TPM1P09493 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
TPM1P09493 AC139713.2-215ENST00000641428 5037 ntBASIC5.71□□□□□ -1.5
TPM1P09493 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.71□□□□□ -1.5
TPM1P09493 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
TPM1P09493 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.71□□□□□ -1.5
TPM1P09493 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.7□□□□□ -1.5
TPM1P09493 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
TPM1P09493 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
TPM1P09493 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.7□□□□□ -1.5
TPM1P09493 RNU1-146P-201ENST00000364015 165 ntBASIC5.7□□□□□ -1.5
TPM1P09493 SNORA79B-201ENST00000410557 148 ntBASIC5.7□□□□□ -1.5
TPM1P09493 AL356968.2-201ENST00000412769 1257 ntBASIC5.7□□□□□ -1.5
TPM1P09493 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.7□□□□□ -1.5
TPM1P09493 AC013268.2-201ENST00000420753 337 ntBASIC5.7□□□□□ -1.5
TPM1P09493 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.7□□□□□ -1.5
TPM1P09493 AC009238.2-201ENST00000431026 355 ntBASIC5.7□□□□□ -1.5
TPM1P09493 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC5.7□□□□□ -1.5
TPM1P09493 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.7□□□□□ -1.5
TPM1P09493 FMO7P-201ENST00000436045 768 ntBASIC5.7□□□□□ -1.5
TPM1P09493 AC019185.1-201ENST00000442718 389 ntBASIC5.7□□□□□ -1.5
TPM1P09493 EEF1B2P6-201ENST00000445713 673 ntBASIC5.7□□□□□ -1.5
TPM1P09493 AC073476.1-201ENST00000452854 407 ntBASIC5.7□□□□□ -1.5
TPM1P09493 HLA-DPA3-207ENST00000454398 229 ntBASIC5.7□□□□□ -1.5
TPM1P09493 AL035090.1-201ENST00000454835 332 ntBASIC5.7□□□□□ -1.5
TPM1P09493 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TPM1P09493 RN7SL447P-201ENST00000494711 245 ntBASIC5.7□□□□□ -1.5
TPM1P09493 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.7□□□□□ -1.5
TPM1P09493 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.7□□□□□ -1.5
TPM1P09493 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.7□□□□□ -1.5
TPM1P09493 RFPL4AP3-201ENST00000515267 345 ntBASIC5.7□□□□□ -1.5
TPM1P09493 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.7□□□□□ -1.5
TPM1P09493 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.7□□□□□ -1.5
TPM1P09493 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.7□□□□□ -1.5
TPM1P09493 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.7□□□□□ -1.5
TPM1P09493 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TPM1P09493 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
TPM1P09493 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.7□□□□□ -1.5
TPM1P09493 AL359091.2-201ENST00000609303 556 ntBASIC5.7□□□□□ -1.5
TPM1P09493 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.7□□□□□ -1.5
TPM1P09493 AC025262.3-201ENST00000623666 360 ntBASIC5.7□□□□□ -1.5
TPM1P09493 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TPM1P09493 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TPM1P09493 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
TPM1P09493 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.7□□□□□ -1.5
TPM1P09493 AC126323.6-202ENST00000568092 3511 ntBASIC5.7□□□□□ -1.5
TPM1P09493 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
TPM1P09493 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
TPM1P09493 AC000123.3-201ENST00000624029 4975 ntBASIC5.69□□□□□ -1.5
TPM1P09493 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
TPM1P09493 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
TPM1P09493 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
TPM1P09493 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
TPM1P09493 RNU1-74P-201ENST00000384108 171 ntBASIC5.69□□□□□ -1.5
TPM1P09493 MIR137-201ENST00000385223 102 ntBASIC5.69□□□□□ -1.5
TPM1P09493 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.69□□□□□ -1.5
TPM1P09493 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC5.69□□□□□ -1.5
TPM1P09493 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.69□□□□□ -1.5
TPM1P09493 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.69□□□□□ -1.5
TPM1P09493 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.69□□□□□ -1.5
TPM1P09493 AC093166.2-201ENST00000455969 1017 ntBASIC5.69□□□□□ -1.5
TPM1P09493 CYCSP34-201ENST00000458172 304 ntBASIC5.69□□□□□ -1.5
TPM1P09493 RN7SL51P-201ENST00000468230 285 ntBASIC5.69□□□□□ -1.5
TPM1P09493 AC112206.1-201ENST00000468416 477 ntBASIC5.69□□□□□ -1.5
TPM1P09493 AP002884.1-201ENST00000479691 655 ntBASIC5.69□□□□□ -1.5
TPM1P09493 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.69□□□□□ -1.5
TPM1P09493 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.69□□□□□ -1.5
TPM1P09493 TRIM77BP-201ENST00000524985 1119 ntBASIC5.69□□□□□ -1.5
TPM1P09493 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.69□□□□□ -1.5
TPM1P09493 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.69□□□□□ -1.5
TPM1P09493 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.69□□□□□ -1.5
TPM1P09493 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC5.69□□□□□ -1.5
TPM1P09493 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
TPM1P09493 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.69□□□□□ -1.5
TPM1P09493 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.69□□□□□ -1.5
TPM1P09493 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
TPM1P09493 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TPM1P09493 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TPM1P09493 CASC19-221ENST00000641309 1382 ntBASIC5.68□□□□□ -1.5
TPM1P09493 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
TPM1P09493 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
TPM1P09493 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.68□□□□□ -1.5
TPM1P09493 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
TPM1P09493 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
TPM1P09493 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
TPM1P09493 RNA5SP46-201ENST00000362370 120 ntBASIC5.68□□□□□ -1.5
TPM1P09493 RNA5SP433-201ENST00000364491 114 ntBASIC5.68□□□□□ -1.5
TPM1P09493 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.68□□□□□ -1.5
TPM1P09493 HMGN1P20-201ENST00000411849 300 ntBASIC5.68□□□□□ -1.5
TPM1P09493 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.68□□□□□ -1.5
TPM1P09493 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.68□□□□□ -1.5
TPM1P09493 TNPO1P1-201ENST00000423641 1138 ntBASIC5.68□□□□□ -1.5
TPM1P09493 GAPDHP34-201ENST00000432112 823 ntBASIC5.68□□□□□ -1.5
TPM1P09493 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.68□□□□□ -1.5
TPM1P09493 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.68□□□□□ -1.5
TPM1P09493 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
TPM1P09493 RN7SKP183-201ENST00000517169 324 ntBASIC5.68□□□□□ -1.5
TPM1P09493 HMGB1P19-201ENST00000517578 577 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms