Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC7.03□□□□□ -1.28
HMGB1P09429 AP002512.4-202ENST00000641599 4530 ntBASIC7.03□□□□□ -1.28
HMGB1P09429 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
HMGB1P09429 ODF3-202ENST00000342593 386 ntTSL 5 BASIC7.03□□□□□ -1.28
HMGB1P09429 RN7SKP171-201ENST00000364417 303 ntBASIC7.03□□□□□ -1.28
HMGB1P09429 RNU6-481P-201ENST00000384194 107 ntBASIC7.03□□□□□ -1.28
HMGB1P09429 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
HMGB1P09429 AL596448.1-201ENST00000415024 392 ntBASIC7.03□□□□□ -1.28
HMGB1P09429 PNKDP1-201ENST00000435914 430 ntBASIC7.03□□□□□ -1.28
HMGB1P09429 AL663074.2-201ENST00000440621 479 ntBASIC7.03□□□□□ -1.28
HMGB1P09429 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC7.03□□□□□ -1.28
HMGB1P09429 BMS1P10-201ENST00000443754 1120 ntBASIC7.03□□□□□ -1.28
HMGB1P09429 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC7.03□□□□□ -1.28
HMGB1P09429 AC068135.1-201ENST00000446164 246 ntBASIC7.03□□□□□ -1.28
HMGB1P09429 ZNF736P6Y-201ENST00000447526 1213 ntBASIC7.03□□□□□ -1.28
HMGB1P09429 EEF1B2P3-201ENST00000447718 678 ntBASIC7.03□□□□□ -1.28
HMGB1P09429 AC005077.1-201ENST00000449226 375 ntBASIC7.03□□□□□ -1.28
HMGB1P09429 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC7.03□□□□□ -1.28
HMGB1P09429 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC7.03□□□□□ -1.28
HMGB1P09429 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC7.03□□□□□ -1.28
HMGB1P09429 AL117692.1-201ENST00000494283 713 ntBASIC7.03□□□□□ -1.28
HMGB1P09429 RN7SKP283-201ENST00000517197 270 ntBASIC7.03□□□□□ -1.28
HMGB1P09429 OR4R2P-201ENST00000530815 597 ntBASIC7.03□□□□□ -1.28
HMGB1P09429 OR8G3P-201ENST00000533406 921 ntBASIC7.03□□□□□ -1.28
HMGB1P09429 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC7.03□□□□□ -1.28
HMGB1P09429 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC7.03□□□□□ -1.28
HMGB1P09429 AL121594.2-201ENST00000541658 472 ntBASIC7.03□□□□□ -1.28
HMGB1P09429 AC106734.1-201ENST00000568646 663 ntBASIC7.03□□□□□ -1.28
HMGB1P09429 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC7.03□□□□□ -1.28
HMGB1P09429 DHFRP1-201ENST00000579682 559 ntBASIC7.03□□□□□ -1.28
HMGB1P09429 AP005119.1-201ENST00000580956 292 ntBASIC7.03□□□□□ -1.28
HMGB1P09429 AC005244.1-201ENST00000582566 339 ntBASIC7.03□□□□□ -1.28
HMGB1P09429 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC7.03□□□□□ -1.28
HMGB1P09429 AC090236.2-201ENST00000587933 1101 ntBASIC7.03□□□□□ -1.28
HMGB1P09429 AC026741.1-201ENST00000605892 482 ntBASIC7.03□□□□□ -1.28
HMGB1P09429 AL136131.3-201ENST00000607600 188 ntBASIC7.03□□□□□ -1.28
HMGB1P09429 AP001437.1-201ENST00000608783 456 ntBASIC7.03□□□□□ -1.28
HMGB1P09429 AC092266.1-201ENST00000610958 165 ntBASIC7.03□□□□□ -1.28
HMGB1P09429 AC004801.6-201ENST00000616571 978 ntBASIC7.03□□□□□ -1.28
HMGB1P09429 STMN1P1-201ENST00000617809 440 ntBASIC7.03□□□□□ -1.28
HMGB1P09429 AL591926.1-201ENST00000620542 217 ntBASIC7.03□□□□□ -1.28
HMGB1P09429 AP001052.1-201ENST00000626421 99 ntBASIC7.03□□□□□ -1.28
HMGB1P09429 AC132825.7-201ENST00000638744 335 ntBASIC7.03□□□□□ -1.28
HMGB1P09429 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
HMGB1P09429 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HMGB1P09429 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HMGB1P09429 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
HMGB1P09429 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HMGB1P09429 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HMGB1P09429 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
HMGB1P09429 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
HMGB1P09429 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
HMGB1P09429 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HMGB1P09429 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HMGB1P09429 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HMGB1P09429 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC7.02□□□□□ -1.29
HMGB1P09429 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
HMGB1P09429 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
HMGB1P09429 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
HMGB1P09429 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC7.02□□□□□ -1.29
HMGB1P09429 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HMGB1P09429 RNU6-543P-201ENST00000362576 108 ntBASIC7.02□□□□□ -1.29
HMGB1P09429 RNA5SP232-201ENST00000364144 119 ntBASIC7.02□□□□□ -1.29
HMGB1P09429 SNORA40.4-201ENST00000390971 128 ntBASIC7.02□□□□□ -1.29
HMGB1P09429 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC7.02□□□□□ -1.29
HMGB1P09429 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC7.02□□□□□ -1.29
HMGB1P09429 RPS4XP5-201ENST00000419038 768 ntBASIC7.02□□□□□ -1.29
HMGB1P09429 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC7.02□□□□□ -1.29
HMGB1P09429 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC7.02□□□□□ -1.29
HMGB1P09429 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC7.02□□□□□ -1.29
HMGB1P09429 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC7.02□□□□□ -1.29
HMGB1P09429 CDY14P-201ENST00000431260 1014 ntBASIC7.02□□□□□ -1.29
HMGB1P09429 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC7.02□□□□□ -1.29
HMGB1P09429 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
HMGB1P09429 CDY12P-201ENST00000440679 1015 ntBASIC7.02□□□□□ -1.29
HMGB1P09429 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
HMGB1P09429 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
HMGB1P09429 CDY13P-201ENST00000445813 1015 ntBASIC7.02□□□□□ -1.29
HMGB1P09429 AL596266.1-201ENST00000448132 400 ntBASIC7.02□□□□□ -1.29
HMGB1P09429 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC7.02□□□□□ -1.29
HMGB1P09429 CDY23P-201ENST00000451661 1014 ntBASIC7.02□□□□□ -1.29
HMGB1P09429 RN7SL269P-201ENST00000467795 305 ntBASIC7.02□□□□□ -1.29
HMGB1P09429 CYCSP20-201ENST00000473154 315 ntBASIC7.02□□□□□ -1.29
HMGB1P09429 OR5H3P-201ENST00000502817 919 ntBASIC7.02□□□□□ -1.29
HMGB1P09429 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC7.02□□□□□ -1.29
HMGB1P09429 MTCO2P9-201ENST00000503214 694 ntBASIC7.02□□□□□ -1.29
HMGB1P09429 AC122718.2-201ENST00000505325 591 ntBASIC7.02□□□□□ -1.29
HMGB1P09429 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC7.02□□□□□ -1.29
HMGB1P09429 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC7.02□□□□□ -1.29
HMGB1P09429 SNORD116-26-201ENST00000516006 96 ntBASIC7.02□□□□□ -1.29
HMGB1P09429 RN7SKP35-201ENST00000517210 151 ntBASIC7.02□□□□□ -1.29
HMGB1P09429 AC113192.3-201ENST00000529152 742 ntBASIC7.02□□□□□ -1.29
HMGB1P09429 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC7.02□□□□□ -1.29
HMGB1P09429 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
HMGB1P09429 PDCD5P1-201ENST00000543528 309 ntBASIC7.02□□□□□ -1.29
HMGB1P09429 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC7.02□□□□□ -1.29
HMGB1P09429 RPA2P1-201ENST00000556557 721 ntBASIC7.02□□□□□ -1.29
HMGB1P09429 AL845552.1-201ENST00000556820 323 ntBASIC7.02□□□□□ -1.29
HMGB1P09429 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC7.02□□□□□ -1.29
HMGB1P09429 AC010857.1-201ENST00000606398 594 ntBASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms