Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 TRIM51GP-201ENST00000534741 1350 ntBASIC5.41□□□□□ -1.54
CD48P09326 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.41□□□□□ -1.54
CD48P09326 AC018765.1-201ENST00000623357 3446 ntBASIC5.41□□□□□ -1.54
CD48P09326 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CD48P09326 AC025574.1-201ENST00000554784 1653 ntBASIC5.4□□□□□ -1.54
CD48P09326 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.4□□□□□ -1.54
CD48P09326 TCP1P3-201ENST00000414406 1498 ntBASIC5.4□□□□□ -1.54
CD48P09326 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CD48P09326 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
CD48P09326 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC5.4□□□□□ -1.54
CD48P09326 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CD48P09326 AC211486.3-201ENST00000412694 621 ntBASIC5.4□□□□□ -1.54
CD48P09326 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.4□□□□□ -1.54
CD48P09326 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.4□□□□□ -1.54
CD48P09326 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
CD48P09326 CFL1P1-202ENST00000432948 411 ntBASIC5.4□□□□□ -1.54
CD48P09326 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.4□□□□□ -1.54
CD48P09326 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.4□□□□□ -1.54
CD48P09326 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.4□□□□□ -1.54
CD48P09326 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.4□□□□□ -1.54
CD48P09326 AL500527.1-201ENST00000448532 255 ntBASIC5.4□□□□□ -1.54
CD48P09326 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.4□□□□□ -1.54
CD48P09326 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.4□□□□□ -1.54
CD48P09326 AC011225.1-201ENST00000457751 369 ntBASIC5.4□□□□□ -1.54
CD48P09326 AC245028.2-201ENST00000458673 253 ntBASIC5.4□□□□□ -1.54
CD48P09326 SIAH1P1-201ENST00000479411 923 ntBASIC5.4□□□□□ -1.54
CD48P09326 AL136038.1-201ENST00000497246 351 ntBASIC5.4□□□□□ -1.54
CD48P09326 MYL12BP2-201ENST00000503948 512 ntBASIC5.4□□□□□ -1.54
CD48P09326 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.4□□□□□ -1.54
CD48P09326 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.4□□□□□ -1.54
CD48P09326 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.4□□□□□ -1.54
CD48P09326 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC5.4□□□□□ -1.54
CD48P09326 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.4□□□□□ -1.54
CD48P09326 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.4□□□□□ -1.54
CD48P09326 AL391597.1-201ENST00000618707 694 ntBASIC5.4□□□□□ -1.54
CD48P09326 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.4□□□□□ -1.55
CD48P09326 AC235565.1-201ENST00000456962 1325 ntBASIC5.4□□□□□ -1.55
CD48P09326 CR383656.5-201ENST00000547616 1340 ntBASIC5.4□□□□□ -1.55
CD48P09326 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.4□□□□□ -1.55
CD48P09326 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
CD48P09326 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
CD48P09326 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.4□□□□□ -1.55
CD48P09326 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
CD48P09326 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CD48P09326 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CD48P09326 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CD48P09326 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CD48P09326 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.39□□□□□ -1.55
CD48P09326 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CD48P09326 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
CD48P09326 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CD48P09326 RNA5SP223-201ENST00000365174 120 ntBASIC5.39□□□□□ -1.55
CD48P09326 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.39□□□□□ -1.55
CD48P09326 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
CD48P09326 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CD48P09326 RNU1-74P-201ENST00000384108 171 ntBASIC5.39□□□□□ -1.55
CD48P09326 OR3A2-201ENST00000408891 1076 ntBASIC5.39□□□□□ -1.55
CD48P09326 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.39□□□□□ -1.55
CD48P09326 GNG5P5-201ENST00000420444 220 ntBASIC5.39□□□□□ -1.55
CD48P09326 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.39□□□□□ -1.55
CD48P09326 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC5.39□□□□□ -1.55
CD48P09326 AL121776.1-201ENST00000429337 372 ntBASIC5.39□□□□□ -1.55
CD48P09326 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC5.39□□□□□ -1.55
CD48P09326 AC012512.1-201ENST00000446594 718 ntBASIC5.39□□□□□ -1.55
CD48P09326 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.39□□□□□ -1.55
CD48P09326 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.39□□□□□ -1.55
CD48P09326 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CD48P09326 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
CD48P09326 WDR61-205ENST00000558459 884 ntTSL 3 BASIC5.39□□□□□ -1.55
CD48P09326 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.39□□□□□ -1.55
CD48P09326 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.39□□□□□ -1.55
CD48P09326 AC138473.1-201ENST00000605717 526 ntBASIC5.39□□□□□ -1.55
CD48P09326 BX322635.1-201ENST00000605804 496 ntBASIC5.39□□□□□ -1.55
CD48P09326 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.39□□□□□ -1.55
CD48P09326 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.39□□□□□ -1.55
CD48P09326 AC003001.2-201ENST00000616294 831 ntBASIC5.39□□□□□ -1.55
CD48P09326 AC118658.2-201ENST00000618697 459 ntBASIC5.39□□□□□ -1.55
CD48P09326 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.39□□□□□ -1.55
CD48P09326 AL049767.1-202ENST00000637826 242 ntBASIC5.39□□□□□ -1.55
CD48P09326 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
CD48P09326 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.39□□□□□ -1.55
CD48P09326 SAMMSON-209ENST00000641222 1100 ntBASIC5.39□□□□□ -1.55
CD48P09326 SAMMSON-227ENST00000642114 1199 ntBASIC5.39□□□□□ -1.55
CD48P09326 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CD48P09326 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
CD48P09326 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.39□□□□□ -1.55
CD48P09326 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.39□□□□□ -1.55
CD48P09326 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.39□□□□□ -1.55
CD48P09326 PCAT14-202ENST00000627127 3935 ntBASIC5.39□□□□□ -1.55
CD48P09326 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.39□□□□□ -1.55
CD48P09326 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.39□□□□□ -1.55
CD48P09326 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
CD48P09326 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
CD48P09326 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CD48P09326 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
CD48P09326 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
CD48P09326 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.38□□□□□ -1.55
CD48P09326 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CD48P09326 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
CD48P09326 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms