Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.84□□□□□ -1.63
P04436 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.84□□□□□ -1.63
P04436 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
P04436 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
P04436 U3.2-201ENST00000362981 210 ntBASIC4.84□□□□□ -1.63
P04436 RN7SKP153-201ENST00000365026 316 ntBASIC4.84□□□□□ -1.63
P04436 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
P04436 OR8V1P-201ENST00000395193 873 ntBASIC4.84□□□□□ -1.63
P04436 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
P04436 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
P04436 AC005033.1-201ENST00000428904 813 ntBASIC4.84□□□□□ -1.63
P04436 AL138787.1-202ENST00000437804 898 ntBASIC4.84□□□□□ -1.63
P04436 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC4.84□□□□□ -1.63
P04436 MTCO3P17-201ENST00000443775 513 ntBASIC4.84□□□□□ -1.63
P04436 CEACAMP7-201ENST00000444105 496 ntBASIC4.84□□□□□ -1.63
P04436 AC023271.1-201ENST00000445936 1090 ntBASIC4.84□□□□□ -1.63
P04436 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
P04436 RN7SL515P-201ENST00000463999 297 ntBASIC4.84□□□□□ -1.63
P04436 AP000797.2-201ENST00000475768 606 ntBASIC4.84□□□□□ -1.63
P04436 RPSAP50-201ENST00000481955 852 ntBASIC4.84□□□□□ -1.63
P04436 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.84□□□□□ -1.63
P04436 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.84□□□□□ -1.63
P04436 HMGN1P9-201ENST00000515212 298 ntBASIC4.84□□□□□ -1.63
P04436 AC022360.1-201ENST00000521058 340 ntBASIC4.84□□□□□ -1.63
P04436 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.84□□□□□ -1.63
P04436 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.84□□□□□ -1.63
P04436 AC127381.1-201ENST00000555979 939 ntBASIC4.84□□□□□ -1.63
P04436 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC4.84□□□□□ -1.63
P04436 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.84□□□□□ -1.63
P04436 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.84□□□□□ -1.63
P04436 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.84□□□□□ -1.63
P04436 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC4.84□□□□□ -1.63
P04436 AP002884.5-201ENST00000595053 1132 ntBASIC4.84□□□□□ -1.63
P04436 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC4.84□□□□□ -1.63
P04436 AC009237.13-201ENST00000603193 276 ntBASIC4.84□□□□□ -1.63
P04436 AC009597.2-201ENST00000604659 592 ntBASIC4.84□□□□□ -1.63
P04436 AL159169.2-201ENST00000610061 1269 ntBASIC4.84□□□□□ -1.63
P04436 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
P04436 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
P04436 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC4.84□□□□□ -1.63
P04436 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
P04436 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
P04436 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC4.84□□□□□ -1.63
P04436 AC083899.1-201ENST00000454465 3819 ntBASIC4.84□□□□□ -1.64
P04436 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.64
P04436 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
P04436 AC114947.2-201ENST00000565748 2125 ntBASIC4.84□□□□□ -1.64
P04436 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.64
P04436 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
P04436 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.83□□□□□ -1.64
P04436 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
P04436 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
P04436 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
P04436 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.83□□□□□ -1.64
P04436 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
P04436 AC068870.3-201ENST00000625077 2536 ntBASIC4.83□□□□□ -1.64
P04436 MTCO1P22-201ENST00000604619 1360 ntBASIC4.83□□□□□ -1.64
P04436 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
P04436 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
P04436 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.83□□□□□ -1.64
P04436 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
P04436 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.83□□□□□ -1.64
P04436 AL672167.2-201ENST00000377164 879 ntBASIC4.83□□□□□ -1.64
P04436 SNORA70.6-201ENST00000383934 134 ntBASIC4.83□□□□□ -1.64
P04436 RN7SKP273-201ENST00000411392 314 ntBASIC4.83□□□□□ -1.64
P04436 DPPA2P3-201ENST00000411853 655 ntBASIC4.83□□□□□ -1.64
P04436 AC211486.3-201ENST00000412694 621 ntBASIC4.83□□□□□ -1.64
P04436 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC4.83□□□□□ -1.64
P04436 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
P04436 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.83□□□□□ -1.64
P04436 AC090018.1-201ENST00000434369 367 ntBASIC4.83□□□□□ -1.64
P04436 AL161722.2-201ENST00000434731 981 ntBASIC4.83□□□□□ -1.64
P04436 AC009127.1-201ENST00000467090 155 ntBASIC4.83□□□□□ -1.64
P04436 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.83□□□□□ -1.64
P04436 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC4.83□□□□□ -1.64
P04436 RNA5SP373-201ENST00000517271 95 ntBASIC4.83□□□□□ -1.64
P04436 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.83□□□□□ -1.64
P04436 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.83□□□□□ -1.64
P04436 MIR3691-201ENST00000578066 90 ntBASIC4.83□□□□□ -1.64
P04436 MIR7853-201ENST00000584820 132 ntBASIC4.83□□□□□ -1.64
P04436 AC010615.3-201ENST00000597319 394 ntBASIC4.83□□□□□ -1.64
P04436 AC025857.2-201ENST00000602711 238 ntBASIC4.83□□□□□ -1.64
P04436 AC067838.1-201ENST00000606064 577 ntBASIC4.83□□□□□ -1.64
P04436 AL021707.7-201ENST00000607991 416 ntBASIC4.83□□□□□ -1.64
P04436 AC099654.6-201ENST00000636487 512 ntBASIC4.83□□□□□ -1.64
P04436 AC135068.12-201ENST00000637370 931 ntBASIC4.83□□□□□ -1.64
P04436 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.83□□□□□ -1.64
P04436 AC003973.3-201ENST00000624863 2822 ntBASIC4.83□□□□□ -1.64
P04436 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
P04436 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC4.83□□□□□ -1.64
P04436 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
P04436 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC4.83□□□□□ -1.64
P04436 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
P04436 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
P04436 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
P04436 NLRP3P1-201ENST00000622303 1785 ntBASIC4.83□□□□□ -1.64
P04436 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC4.83□□□□□ -1.64
P04436 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
P04436 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
P04436 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 134 ms