Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 BACH2-201ENST00000257749 9113 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
APOBP04114 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
APOBP04114 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC3.05□□□□□ -1.92
APOBP04114 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC3.05□□□□□ -1.92
APOBP04114 AC073358.1-201ENST00000505671 684 ntBASIC3.05□□□□□ -1.92
APOBP04114 AP000889.1-201ENST00000530968 660 ntBASIC3.05□□□□□ -1.92
APOBP04114 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
APOBP04114 ARF4P1-201ENST00000605447 541 ntBASIC3.05□□□□□ -1.92
APOBP04114 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC3.05□□□□□ -1.92
APOBP04114 AC015712.7-201ENST00000615211 635 ntBASIC3.05□□□□□ -1.92
APOBP04114 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
APOBP04114 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
APOBP04114 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC3.05□□□□□ -1.92
APOBP04114 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC3.05□□□□□ -1.92
APOBP04114 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC3.05□□□□□ -1.92
APOBP04114 ZFX-202ENST00000338565 2906 ntTSL 5 BASIC3.05□□□□□ -1.92
APOBP04114 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.05□□□□□ -1.92
APOBP04114 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
APOBP04114 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
APOBP04114 RNA5SP509-201ENST00000364577 119 ntBASIC3.05□□□□□ -1.92
APOBP04114 TMBIM7P-201ENST00000418074 855 ntBASIC3.05□□□□□ -1.92
APOBP04114 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC3.05□□□□□ -1.92
APOBP04114 AC106806.2-201ENST00000509365 500 ntBASIC3.05□□□□□ -1.92
APOBP04114 FTH1P21-201ENST00000512179 511 ntBASIC3.05□□□□□ -1.92
APOBP04114 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC3.05□□□□□ -1.92
APOBP04114 RN7SL176P-201ENST00000580352 264 ntBASIC3.05□□□□□ -1.92
APOBP04114 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.05□□□□□ -1.92
APOBP04114 AC069542.2-201ENST00000624816 216 ntBASIC3.05□□□□□ -1.92
APOBP04114 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC3.05□□□□□ -1.92
APOBP04114 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
APOBP04114 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
APOBP04114 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
APOBP04114 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
APOBP04114 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
APOBP04114 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
APOBP04114 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
APOBP04114 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
APOBP04114 GABRA4-201ENST00000264318 11973 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
APOBP04114 SNORA48.4-201ENST00000391089 134 ntBASIC3.05□□□□□ -1.92
APOBP04114 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
APOBP04114 YME1L1P1-201ENST00000429435 297 ntBASIC3.05□□□□□ -1.92
APOBP04114 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.05□□□□□ -1.92
APOBP04114 ARL2BPP10-201ENST00000446487 531 ntBASIC3.05□□□□□ -1.92
APOBP04114 SLC25A18P1-201ENST00000449385 454 ntBASIC3.05□□□□□ -1.92
APOBP04114 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC3.05□□□□□ -1.92
APOBP04114 RN7SL303P-201ENST00000469773 251 ntBASIC3.05□□□□□ -1.92
APOBP04114 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC3.05□□□□□ -1.92
APOBP04114 AC073073.1-201ENST00000493920 463 ntBASIC3.05□□□□□ -1.92
APOBP04114 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC3.05□□□□□ -1.92
APOBP04114 RN7SL703P-201ENST00000578485 302 ntBASIC3.05□□□□□ -1.92
APOBP04114 MIR3200-201ENST00000580767 85 ntBASIC3.05□□□□□ -1.92
APOBP04114 AP001267.4-201ENST00000602598 545 ntBASIC3.05□□□□□ -1.92
APOBP04114 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC3.05□□□□□ -1.92
APOBP04114 BNIP3P35-201ENST00000604530 490 ntBASIC3.05□□□□□ -1.92
APOBP04114 AL162574.1-201ENST00000615702 950 ntBASIC3.05□□□□□ -1.92
APOBP04114 PCDH15-210ENST00000395438 5806 ntAPPRIS ALT2 TSL 5 BASIC3.05□□□□□ -1.92
APOBP04114 ECM1P2-201ENST00000503354 1577 ntBASIC3.05□□□□□ -1.92
APOBP04114 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC3.05□□□□□ -1.92
APOBP04114 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
APOBP04114 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
APOBP04114 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC3.05□□□□□ -1.92
APOBP04114 MSL3P1-202ENST00000440028 1468 ntBASIC3.04□□□□□ -1.92
APOBP04114 SHROOM4-202ENST00000376020 9556 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
APOBP04114 ZNF812P-201ENST00000457674 1694 ntBASIC3.04□□□□□ -1.92
APOBP04114 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC3.04□□□□□ -1.92
APOBP04114 ADAMTS4-202ENST00000367996 9773 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
APOBP04114 EIF3F-208ENST00000533626 7540 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
APOBP04114 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
APOBP04114 CASC19-284ENST00000642142 1868 ntBASIC3.04□□□□□ -1.92
APOBP04114 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
APOBP04114 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC3.04□□□□□ -1.92
APOBP04114 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.04□□□□□ -1.92
APOBP04114 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.04□□□□□ -1.92
APOBP04114 RPS29P17-201ENST00000430795 166 ntBASIC3.04□□□□□ -1.92
APOBP04114 RPL7AP61-201ENST00000443410 636 ntBASIC3.04□□□□□ -1.92
APOBP04114 OR7E125P-201ENST00000443450 846 ntBASIC3.04□□□□□ -1.92
APOBP04114 RN7SL98P-201ENST00000462271 300 ntBASIC3.04□□□□□ -1.92
APOBP04114 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC3.04□□□□□ -1.92
APOBP04114 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC3.04□□□□□ -1.92
APOBP04114 AC007016.1-201ENST00000512110 244 ntBASIC3.04□□□□□ -1.92
APOBP04114 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC3.04□□□□□ -1.92
APOBP04114 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
APOBP04114 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
APOBP04114 AC138907.8-201ENST00000623981 2256 ntBASIC3.04□□□□□ -1.92
APOBP04114 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC3.04□□□□□ -1.92
APOBP04114 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC3.04□□□□□ -1.92
APOBP04114 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC3.04□□□□□ -1.92
APOBP04114 RMST-209ENST00000639542 3269 ntTSL 5 BASIC3.04□□□□□ -1.92
APOBP04114 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
APOBP04114 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC3.04□□□□□ -1.92
APOBP04114 CBFA2T2-203ENST00000346541 7737 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
APOBP04114 RNF152-201ENST00000312828 9501 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
APOBP04114 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC3.04□□□□□ -1.92
APOBP04114 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
APOBP04114 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
APOBP04114 HYALP1-201ENST00000417674 1279 ntBASIC3.04□□□□□ -1.92
APOBP04114 AL358176.3-201ENST00000420757 454 ntBASIC3.04□□□□□ -1.92
APOBP04114 IGKV1OR9-1-201ENST00000424370 284 ntBASIC3.04□□□□□ -1.92
APOBP04114 RPS3AP54-201ENST00000435535 734 ntBASIC3.04□□□□□ -1.92
APOBP04114 NUTF2P3-201ENST00000448540 384 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms