Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 IGBP1P4-201ENST00000503202 879 ntBASIC5.13□□□□□ -1.59
CLPTM1O96005 BTG4P1-201ENST00000510421 183 ntBASIC5.13□□□□□ -1.59
CLPTM1O96005 AC114781.3-201ENST00000512083 142 ntBASIC5.13□□□□□ -1.59
CLPTM1O96005 AC138938.1-201ENST00000515431 782 ntBASIC5.13□□□□□ -1.59
CLPTM1O96005 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CLPTM1O96005 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC5.13□□□□□ -1.59
CLPTM1O96005 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.13□□□□□ -1.59
CLPTM1O96005 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.13□□□□□ -1.59
CLPTM1O96005 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.13□□□□□ -1.59
CLPTM1O96005 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
CLPTM1O96005 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.13□□□□□ -1.59
CLPTM1O96005 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.13□□□□□ -1.59
CLPTM1O96005 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.13□□□□□ -1.59
CLPTM1O96005 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.13□□□□□ -1.59
CLPTM1O96005 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.13□□□□□ -1.59
CLPTM1O96005 AL137072.1-201ENST00000603444 466 ntBASIC5.13□□□□□ -1.59
CLPTM1O96005 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.13□□□□□ -1.59
CLPTM1O96005 FO681491.1-202ENST00000623392 737 ntBASIC5.13□□□□□ -1.59
CLPTM1O96005 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC5.13□□□□□ -1.59
CLPTM1O96005 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.13□□□□□ -1.59
CLPTM1O96005 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
CLPTM1O96005 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CLPTM1O96005 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
CLPTM1O96005 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.13□□□□□ -1.59
CLPTM1O96005 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CLPTM1O96005 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CLPTM1O96005 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
CLPTM1O96005 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.12□□□□□ -1.59
CLPTM1O96005 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.12□□□□□ -1.59
CLPTM1O96005 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
CLPTM1O96005 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.12□□□□□ -1.59
CLPTM1O96005 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
CLPTM1O96005 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLPTM1O96005 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLPTM1O96005 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLPTM1O96005 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLPTM1O96005 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CLPTM1O96005 RN7SKP292-201ENST00000365522 317 ntBASIC5.12□□□□□ -1.59
CLPTM1O96005 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC5.12□□□□□ -1.59
CLPTM1O96005 SNORD56.6-201ENST00000384569 71 ntBASIC5.12□□□□□ -1.59
CLPTM1O96005 MIR7-1-201ENST00000384871 110 ntBASIC5.12□□□□□ -1.59
CLPTM1O96005 LYPLA1P3-201ENST00000402650 695 ntBASIC5.12□□□□□ -1.59
CLPTM1O96005 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.12□□□□□ -1.59
CLPTM1O96005 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.12□□□□□ -1.59
CLPTM1O96005 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.12□□□□□ -1.59
CLPTM1O96005 AC019205.1-201ENST00000421830 730 ntBASIC5.12□□□□□ -1.59
CLPTM1O96005 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.12□□□□□ -1.59
CLPTM1O96005 CR848007.2-201ENST00000424918 787 ntBASIC5.12□□□□□ -1.59
CLPTM1O96005 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CLPTM1O96005 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC5.12□□□□□ -1.59
CLPTM1O96005 NDUFS5P5-201ENST00000437256 321 ntBASIC5.12□□□□□ -1.59
CLPTM1O96005 AZGP1P2-201ENST00000454506 345 ntBASIC5.12□□□□□ -1.59
CLPTM1O96005 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC5.12□□□□□ -1.59
CLPTM1O96005 AL157777.1-201ENST00000468100 304 ntBASIC5.12□□□□□ -1.59
CLPTM1O96005 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.12□□□□□ -1.59
CLPTM1O96005 AC020779.1-201ENST00000478757 796 ntBASIC5.12□□□□□ -1.59
CLPTM1O96005 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC5.12□□□□□ -1.59
CLPTM1O96005 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.12□□□□□ -1.59
CLPTM1O96005 OR2A3P-201ENST00000493774 953 ntBASIC5.12□□□□□ -1.59
CLPTM1O96005 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.12□□□□□ -1.59
CLPTM1O96005 GAPDHP71-201ENST00000511530 1003 ntBASIC5.12□□□□□ -1.59
CLPTM1O96005 HMGN1P9-201ENST00000515212 298 ntBASIC5.12□□□□□ -1.59
CLPTM1O96005 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC5.12□□□□□ -1.59
CLPTM1O96005 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.12□□□□□ -1.59
CLPTM1O96005 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.12□□□□□ -1.59
CLPTM1O96005 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.12□□□□□ -1.59
CLPTM1O96005 WBP1LP3-201ENST00000523033 208 ntBASIC5.12□□□□□ -1.59
CLPTM1O96005 PMS2P3-207ENST00000529061 717 ntBASIC5.12□□□□□ -1.59
CLPTM1O96005 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.12□□□□□ -1.59
CLPTM1O96005 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.12□□□□□ -1.59
CLPTM1O96005 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.12□□□□□ -1.59
CLPTM1O96005 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.12□□□□□ -1.59
CLPTM1O96005 MIR4675-201ENST00000577898 77 ntBASIC5.12□□□□□ -1.59
CLPTM1O96005 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC5.12□□□□□ -1.59
CLPTM1O96005 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC5.12□□□□□ -1.59
CLPTM1O96005 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC5.12□□□□□ -1.59
CLPTM1O96005 VN1R81P-201ENST00000602085 372 ntBASIC5.12□□□□□ -1.59
CLPTM1O96005 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.12□□□□□ -1.59
CLPTM1O96005 AC145423.1-201ENST00000605712 336 ntBASIC5.12□□□□□ -1.59
CLPTM1O96005 AC037198.3-201ENST00000616754 526 ntBASIC5.12□□□□□ -1.59
CLPTM1O96005 MIR6861-201ENST00000618657 64 ntBASIC5.12□□□□□ -1.59
CLPTM1O96005 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
CLPTM1O96005 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
CLPTM1O96005 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
CLPTM1O96005 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC5.12□□□□□ -1.59
CLPTM1O96005 MTND4P21-201ENST00000453886 1357 ntBASIC5.12□□□□□ -1.59
CLPTM1O96005 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLPTM1O96005 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLPTM1O96005 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.12□□□□□ -1.59
CLPTM1O96005 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CLPTM1O96005 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
CLPTM1O96005 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLPTM1O96005 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLPTM1O96005 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLPTM1O96005 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLPTM1O96005 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.11□□□□□ -1.59
CLPTM1O96005 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLPTM1O96005 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLPTM1O96005 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CLPTM1O96005 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms