Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC2.19□□□□□ -2.06
USH2AO75445 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
USH2AO75445 CDY5P-201ENST00000411487 1580 ntBASIC2.19□□□□□ -2.06
USH2AO75445 CDY9P-201ENST00000451397 1580 ntBASIC2.19□□□□□ -2.06
USH2AO75445 MFSD8-236ENST00000641509 4050 ntBASIC2.19□□□□□ -2.06
USH2AO75445 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
USH2AO75445 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
USH2AO75445 RNU1-130P-201ENST00000363930 160 ntBASIC2.19□□□□□ -2.06
USH2AO75445 TMSB10P2-201ENST00000416049 131 ntBASIC2.19□□□□□ -2.06
USH2AO75445 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
USH2AO75445 PPIAP15-201ENST00000479662 484 ntBASIC2.19□□□□□ -2.06
USH2AO75445 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
USH2AO75445 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC2.19□□□□□ -2.06
USH2AO75445 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
USH2AO75445 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.19□□□□□ -2.06
USH2AO75445 ZBTB40-204ENST00000404138 8992 ntAPPRIS P3 TSL 5 BASIC2.19□□□□□ -2.06
USH2AO75445 AC007114.2-201ENST00000576014 4281 ntBASIC2.19□□□□□ -2.06
USH2AO75445 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.19□□□□□ -2.06
USH2AO75445 HMBOX1-211ENST00000524238 1731 ntTSL 2 BASIC2.19□□□□□ -2.06
USH2AO75445 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
USH2AO75445 NAIP-204ENST00000503719 5347 ntTSL 5 BASIC2.19□□□□□ -2.06
USH2AO75445 KIF13A-203ENST00000378814 6924 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
USH2AO75445 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
USH2AO75445 SMC2-201ENST00000286398 5992 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
USH2AO75445 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
USH2AO75445 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
USH2AO75445 BACH2-210ENST00000537989 9108 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
USH2AO75445 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC2.19□□□□□ -2.06
USH2AO75445 AP001002.1-201ENST00000625148 1513 ntBASIC2.19□□□□□ -2.06
USH2AO75445 AC004076.2-201ENST00000620532 3323 ntBASIC2.18□□□□□ -2.06
USH2AO75445 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
USH2AO75445 KIF1B-212ENST00000622724 8588 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
USH2AO75445 PPARA-203ENST00000407236 9995 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
USH2AO75445 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
USH2AO75445 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
USH2AO75445 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
USH2AO75445 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
USH2AO75445 AL136116.2-201ENST00000404020 785 ntBASIC2.18□□□□□ -2.06
USH2AO75445 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC2.18□□□□□ -2.06
USH2AO75445 ARAFP2-201ENST00000440565 559 ntBASIC2.18□□□□□ -2.06
USH2AO75445 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC2.18□□□□□ -2.06
USH2AO75445 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC2.18□□□□□ -2.06
USH2AO75445 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC2.18□□□□□ -2.06
USH2AO75445 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC2.18□□□□□ -2.06
USH2AO75445 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC2.18□□□□□ -2.06
USH2AO75445 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC2.18□□□□□ -2.06
USH2AO75445 LONP2-201ENST00000285737 8199 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
USH2AO75445 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
USH2AO75445 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC2.18□□□□□ -2.06
USH2AO75445 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
USH2AO75445 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
USH2AO75445 ATP5A1P4-201ENST00000556888 1605 ntBASIC2.18□□□□□ -2.06
USH2AO75445 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
USH2AO75445 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC2.18□□□□□ -2.06
USH2AO75445 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
USH2AO75445 NCOA4P3-201ENST00000513203 1877 ntBASIC2.18□□□□□ -2.06
USH2AO75445 SORL1-201ENST00000260197 10904 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
USH2AO75445 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC2.18□□□□□ -2.06
USH2AO75445 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
USH2AO75445 AL022722.2-201ENST00000402519 180 ntBASIC2.18□□□□□ -2.06
USH2AO75445 PVALB-202ENST00000404171 422 ntTSL 2 BASIC2.18□□□□□ -2.06
USH2AO75445 HYALP1-201ENST00000417674 1279 ntBASIC2.18□□□□□ -2.06
USH2AO75445 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC2.18□□□□□ -2.06
USH2AO75445 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC2.18□□□□□ -2.06
USH2AO75445 RPS17P5-201ENST00000498293 408 ntBASIC2.18□□□□□ -2.06
USH2AO75445 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC2.18□□□□□ -2.06
USH2AO75445 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC2.18□□□□□ -2.06
USH2AO75445 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC2.18□□□□□ -2.06
USH2AO75445 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC2.18□□□□□ -2.06
USH2AO75445 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC2.18□□□□□ -2.06
USH2AO75445 AC107294.1-201ENST00000609524 467 ntBASIC2.18□□□□□ -2.06
USH2AO75445 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC2.18□□□□□ -2.06
USH2AO75445 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
USH2AO75445 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
USH2AO75445 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC2.18□□□□□ -2.06
USH2AO75445 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC2.18□□□□□ -2.06
USH2AO75445 OR7E122P-202ENST00000641144 6171 ntBASIC2.18□□□□□ -2.06
USH2AO75445 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
USH2AO75445 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
USH2AO75445 ABHD2-201ENST00000352732 8735 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
USH2AO75445 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
USH2AO75445 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
USH2AO75445 DOCK3-201ENST00000266037 8755 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
USH2AO75445 SLC7A2-202ENST00000398090 7557 ntAPPRIS P3 TSL 1 (best) BASIC2.18□□□□□ -2.06
USH2AO75445 OR4K17-203ENST00000641633 5068 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
USH2AO75445 CLASP1-203ENST00000409078 8002 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
USH2AO75445 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC2.18□□□□□ -2.06
USH2AO75445 MPRIP-205ENST00000395811 10960 ntAPPRIS ALT1 TSL 1 (best) BASIC2.18□□□□□ -2.06
USH2AO75445 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
USH2AO75445 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC2.18□□□□□ -2.06
USH2AO75445 PLCXD2-205ENST00000636933 7710 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
USH2AO75445 AFDN-207ENST00000400822 7593 ntTSL 5 BASIC2.18□□□□□ -2.06
USH2AO75445 RNA5SP90-201ENST00000364801 99 ntBASIC2.18□□□□□ -2.06
USH2AO75445 AL357515.1-201ENST00000402967 542 ntBASIC2.18□□□□□ -2.06
USH2AO75445 FABP7P1-201ENST00000424004 391 ntBASIC2.18□□□□□ -2.06
USH2AO75445 AC016027.5-201ENST00000427227 210 ntBASIC2.18□□□□□ -2.06
USH2AO75445 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC2.18□□□□□ -2.06
USH2AO75445 NOP56P2-201ENST00000447491 769 ntBASIC2.18□□□□□ -2.06
USH2AO75445 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
USH2AO75445 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms