Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PDLIM1O00151 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.58
PDLIM1O00151 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PDLIM1O00151 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PDLIM1O00151 GAPDHP24-201ENST00000328713 983 ntBASIC5.15□□□□□ -1.59
PDLIM1O00151 ATP5F1P2-201ENST00000398143 760 ntBASIC5.15□□□□□ -1.59
PDLIM1O00151 RPS6P23-201ENST00000413224 722 ntBASIC5.15□□□□□ -1.59
PDLIM1O00151 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
PDLIM1O00151 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.15□□□□□ -1.59
PDLIM1O00151 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.15□□□□□ -1.59
PDLIM1O00151 RPL19P16-201ENST00000433839 588 ntBASIC5.15□□□□□ -1.59
PDLIM1O00151 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.15□□□□□ -1.59
PDLIM1O00151 AC073109.1-201ENST00000445066 978 ntBASIC5.15□□□□□ -1.59
PDLIM1O00151 AL596266.1-201ENST00000448132 400 ntBASIC5.15□□□□□ -1.59
PDLIM1O00151 FCF1P7-201ENST00000451185 558 ntBASIC5.15□□□□□ -1.59
PDLIM1O00151 AC112206.1-201ENST00000468416 477 ntBASIC5.15□□□□□ -1.59
PDLIM1O00151 AC073610.1-201ENST00000489971 396 ntBASIC5.15□□□□□ -1.59
PDLIM1O00151 AC074255.1-201ENST00000511259 501 ntBASIC5.15□□□□□ -1.59
PDLIM1O00151 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
PDLIM1O00151 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.15□□□□□ -1.59
PDLIM1O00151 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.15□□□□□ -1.59
PDLIM1O00151 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC5.15□□□□□ -1.59
PDLIM1O00151 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.15□□□□□ -1.59
PDLIM1O00151 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.15□□□□□ -1.59
PDLIM1O00151 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.15□□□□□ -1.59
PDLIM1O00151 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC5.15□□□□□ -1.59
PDLIM1O00151 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.15□□□□□ -1.59
PDLIM1O00151 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PDLIM1O00151 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PDLIM1O00151 VN1R81P-201ENST00000602085 372 ntBASIC5.15□□□□□ -1.59
PDLIM1O00151 AC009237.17-201ENST00000618111 748 ntBASIC5.15□□□□□ -1.59
PDLIM1O00151 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.15□□□□□ -1.59
PDLIM1O00151 AC022919.1-201ENST00000624979 626 ntBASIC5.15□□□□□ -1.59
PDLIM1O00151 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC5.15□□□□□ -1.59
PDLIM1O00151 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.15□□□□□ -1.59
PDLIM1O00151 OR8G3P-202ENST00000641572 1255 ntBASIC5.15□□□□□ -1.59
PDLIM1O00151 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
PDLIM1O00151 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PDLIM1O00151 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
PDLIM1O00151 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.15□□□□□ -1.59
PDLIM1O00151 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PDLIM1O00151 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.15□□□□□ -1.59
PDLIM1O00151 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PDLIM1O00151 NEAT1-202ENST00000501122 22743 ntBASIC5.14□□□□□ -1.59
PDLIM1O00151 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
PDLIM1O00151 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
PDLIM1O00151 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDLIM1O00151 AC007382.1-201ENST00000624376 2618 ntBASIC5.14□□□□□ -1.59
PDLIM1O00151 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDLIM1O00151 Z83820.1-201ENST00000456978 1499 ntBASIC5.14□□□□□ -1.59
PDLIM1O00151 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PDLIM1O00151 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDLIM1O00151 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.14□□□□□ -1.59
PDLIM1O00151 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDLIM1O00151 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDLIM1O00151 RNA5SP28-201ENST00000363841 119 ntBASIC5.14□□□□□ -1.59
PDLIM1O00151 PPCS-201ENST00000372556 984 ntTSL 2 BASIC5.14□□□□□ -1.59
PDLIM1O00151 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PDLIM1O00151 RPS3AP2-201ENST00000407190 754 ntBASIC5.14□□□□□ -1.59
PDLIM1O00151 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.14□□□□□ -1.59
PDLIM1O00151 RNA5SP146-201ENST00000410743 123 ntBASIC5.14□□□□□ -1.59
PDLIM1O00151 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.14□□□□□ -1.59
PDLIM1O00151 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.14□□□□□ -1.59
PDLIM1O00151 E2F6P2-201ENST00000420708 748 ntBASIC5.14□□□□□ -1.59
PDLIM1O00151 IPPKP1-201ENST00000422501 768 ntBASIC5.14□□□□□ -1.59
PDLIM1O00151 RPS12P5-201ENST00000423449 371 ntBASIC5.14□□□□□ -1.59
PDLIM1O00151 GTF2IP2-201ENST00000424290 697 ntBASIC5.14□□□□□ -1.59
PDLIM1O00151 RPL23AP19-201ENST00000436229 369 ntBASIC5.14□□□□□ -1.59
PDLIM1O00151 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.14□□□□□ -1.59
PDLIM1O00151 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.14□□□□□ -1.59
PDLIM1O00151 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC5.14□□□□□ -1.59
PDLIM1O00151 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.14□□□□□ -1.59
PDLIM1O00151 BTF3P6-201ENST00000448054 499 ntBASIC5.14□□□□□ -1.59
PDLIM1O00151 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.14□□□□□ -1.59
PDLIM1O00151 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.14□□□□□ -1.59
PDLIM1O00151 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.14□□□□□ -1.59
PDLIM1O00151 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC5.14□□□□□ -1.59
PDLIM1O00151 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.14□□□□□ -1.59
PDLIM1O00151 PSMA2P2-201ENST00000504319 686 ntBASIC5.14□□□□□ -1.59
PDLIM1O00151 DUTP7-201ENST00000507982 486 ntBASIC5.14□□□□□ -1.59
PDLIM1O00151 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.14□□□□□ -1.59
PDLIM1O00151 IMPA1P1-201ENST00000510718 842 ntBASIC5.14□□□□□ -1.59
PDLIM1O00151 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.14□□□□□ -1.59
PDLIM1O00151 RNA5SP303-201ENST00000516192 130 ntBASIC5.14□□□□□ -1.59
PDLIM1O00151 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.14□□□□□ -1.59
PDLIM1O00151 CDC42P3-201ENST00000518493 633 ntBASIC5.14□□□□□ -1.59
PDLIM1O00151 AC022826.1-201ENST00000519383 805 ntBASIC5.14□□□□□ -1.59
PDLIM1O00151 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.14□□□□□ -1.59
PDLIM1O00151 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.14□□□□□ -1.59
PDLIM1O00151 IGKV2-4-201ENST00000523070 340 ntBASIC5.14□□□□□ -1.59
PDLIM1O00151 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.14□□□□□ -1.59
PDLIM1O00151 HNRNPRP2-201ENST00000528421 743 ntBASIC5.14□□□□□ -1.59
PDLIM1O00151 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.14□□□□□ -1.59
PDLIM1O00151 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
PDLIM1O00151 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.14□□□□□ -1.59
PDLIM1O00151 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
PDLIM1O00151 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.14□□□□□ -1.59
PDLIM1O00151 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
PDLIM1O00151 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
PDLIM1O00151 OR13C1P-202ENST00000641378 2919 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms