Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.2□□□□□ -1.58
RNF103-CHMP3A0A140T963 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RNF103-CHMP3A0A140T963 NPM1P35-201ENST00000533043 868 ntBASIC5.2□□□□□ -1.58
RNF103-CHMP3A0A140T963 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC5.2□□□□□ -1.58
RNF103-CHMP3A0A140T963 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.2□□□□□ -1.58
RNF103-CHMP3A0A140T963 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.2□□□□□ -1.58
RNF103-CHMP3A0A140T963 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.2□□□□□ -1.58
RNF103-CHMP3A0A140T963 PRPF19P1-201ENST00000584766 898 ntBASIC5.2□□□□□ -1.58
RNF103-CHMP3A0A140T963 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC5.2□□□□□ -1.58
RNF103-CHMP3A0A140T963 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.2□□□□□ -1.58
RNF103-CHMP3A0A140T963 MTCO2P22-201ENST00000603246 681 ntBASIC5.2□□□□□ -1.58
RNF103-CHMP3A0A140T963 MIR6071-201ENST00000616741 78 ntBASIC5.2□□□□□ -1.58
RNF103-CHMP3A0A140T963 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.2□□□□□ -1.58
RNF103-CHMP3A0A140T963 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.2□□□□□ -1.58
RNF103-CHMP3A0A140T963 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.2□□□□□ -1.58
RNF103-CHMP3A0A140T963 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.2□□□□□ -1.58
RNF103-CHMP3A0A140T963 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
RNF103-CHMP3A0A140T963 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
RNF103-CHMP3A0A140T963 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RNF103-CHMP3A0A140T963 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.2□□□□□ -1.58
RNF103-CHMP3A0A140T963 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.2□□□□□ -1.58
RNF103-CHMP3A0A140T963 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RNF103-CHMP3A0A140T963 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RNF103-CHMP3A0A140T963 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.2□□□□□ -1.58
RNF103-CHMP3A0A140T963 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.2□□□□□ -1.58
RNF103-CHMP3A0A140T963 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.2□□□□□ -1.58
RNF103-CHMP3A0A140T963 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 SRRM1P3-201ENST00000426911 2678 ntBASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 OR7E156P-201ENST00000400303 464 ntBASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 ZNF736P10Y-201ENST00000403990 1110 ntBASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 RPS3AP2-201ENST00000407190 754 ntBASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 CTSL3P-202ENST00000412179 788 ntBASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 OR6K4P-201ENST00000423179 955 ntBASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 XKRYP6-201ENST00000440468 1116 ntBASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 XKRYP3-201ENST00000442113 1116 ntBASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 AC012512.1-201ENST00000446594 718 ntBASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 AC021660.1-201ENST00000465006 554 ntBASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 OR52A4P-203ENST00000498233 1014 ntBASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 RNU6-615P-201ENST00000516065 106 ntBASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 RNA5SP271-201ENST00000516700 88 ntBASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 AC067904.2-201ENST00000517322 1283 ntBASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 CDC42P3-201ENST00000518493 633 ntBASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 AC022826.1-201ENST00000519383 805 ntBASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 OR7E10P-201ENST00000526420 991 ntBASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 AC006272.2-201ENST00000594725 163 ntBASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 AC129915.3-201ENST00000634128 948 ntBASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 AC004817.4-201ENST00000602396 3625 ntBASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.19□□□□□ -1.58
RNF103-CHMP3A0A140T963 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF103-CHMP3A0A140T963 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RNF103-CHMP3A0A140T963 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
RNF103-CHMP3A0A140T963 OR52B3P-201ENST00000314715 928 ntBASIC5.18□□□□□ -1.58
RNF103-CHMP3A0A140T963 RNA5SP131-201ENST00000365452 119 ntBASIC5.18□□□□□ -1.58
RNF103-CHMP3A0A140T963 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.18□□□□□ -1.58
RNF103-CHMP3A0A140T963 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RNF103-CHMP3A0A140T963 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RNF103-CHMP3A0A140T963 RN7SKP240-201ENST00000410583 375 ntBASIC5.18□□□□□ -1.58
RNF103-CHMP3A0A140T963 AC211486.3-201ENST00000412694 621 ntBASIC5.18□□□□□ -1.58
RNF103-CHMP3A0A140T963 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.18□□□□□ -1.58
RNF103-CHMP3A0A140T963 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.18□□□□□ -1.58
RNF103-CHMP3A0A140T963 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.18□□□□□ -1.58
RNF103-CHMP3A0A140T963 AC007161.1-204ENST00000423039 460 ntBASIC5.18□□□□□ -1.58
RNF103-CHMP3A0A140T963 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC5.18□□□□□ -1.58
RNF103-CHMP3A0A140T963 HSPD1P12-201ENST00000429127 1069 ntBASIC5.18□□□□□ -1.58
RNF103-CHMP3A0A140T963 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.18□□□□□ -1.58
RNF103-CHMP3A0A140T963 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.18□□□□□ -1.58
RNF103-CHMP3A0A140T963 FHP1-201ENST00000442741 703 ntBASIC5.18□□□□□ -1.58
RNF103-CHMP3A0A140T963 VN1R48P-201ENST00000448149 1036 ntBASIC5.18□□□□□ -1.58
RNF103-CHMP3A0A140T963 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 367.9 ms