Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 TXNP5-201ENST00000441043 315 ntBASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 GTF3AP5-201ENST00000442645 697 ntBASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 AL356981.1-201ENST00000454879 684 ntBASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 RPS4XP1-201ENST00000482189 787 ntBASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 UGT2A3P7-201ENST00000510485 734 ntBASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 ASNSP4-201ENST00000511103 447 ntBASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 AC090527.3-201ENST00000619041 548 ntBASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 AL512356.3-201ENST00000623005 461 ntBASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.58□□□□□ -1.68
TRAV27A0A087WT01 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 RNA5SP132-201ENST00000364725 118 ntBASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 AL353625.1-202ENST00000366273 571 ntBASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 AC013442.1-201ENST00000397347 228 ntBASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 BTF3P6-201ENST00000448054 499 ntBASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 AC144530.1-201ENST00000452862 555 ntBASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 AC009127.1-201ENST00000467090 155 ntBASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 AC108693.1-201ENST00000496068 432 ntBASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 AC024940.3-201ENST00000538551 316 ntBASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 AC026124.2-201ENST00000621847 656 ntBASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 KARSP1-201ENST00000451871 1752 ntBASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 TET1P1-201ENST00000426627 2301 ntBASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 AC000374.1-201ENST00000434698 1745 ntBASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 AL022393.1-201ENST00000625142 1677 ntBASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 AC012078.1-201ENST00000405035 1646 ntBASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.57□□□□□ -1.68
TRAV27A0A087WT01 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.56□□□□□ -1.68
TRAV27A0A087WT01 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRAV27A0A087WT01 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TRAV27A0A087WT01 SLC41A2-201ENST00000258538 4449 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRAV27A0A087WT01 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRAV27A0A087WT01 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC4.56□□□□□ -1.68
TRAV27A0A087WT01 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRAV27A0A087WT01 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TRAV27A0A087WT01 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TRAV27A0A087WT01 AC005261.6-201ENST00000623072 1387 ntBASIC4.56□□□□□ -1.68
TRAV27A0A087WT01 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms