Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 KIAA1671-206ENST00000637069 6510 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 CYP19A1-216ENST00000559878 1958 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 HUS1-201ENST00000258774 2935 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 SORBS1-207ENST00000371239 2436 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 AL031594.1-201ENST00000417123 1932 ntTSL 2 BASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 AL133320.1-201ENST00000621423 2352 ntBASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 CASC19-205ENST00000641013 1411 ntBASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 LRRC37A6P-202ENST00000448648 5444 ntBASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 OR10AD1-201ENST00000310248 1305 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 ZNF322-201ENST00000415922 4817 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 SERPINE2-203ENST00000409840 2569 ntAPPRIS ALT1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 PIP-201ENST00000291009 585 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 TPPP2-201ENST00000321760 752 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 Y_RNA.574-201ENST00000384766 95 ntBASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 AL049697.2-201ENST00000403708 294 ntBASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 MRPL50P2-201ENST00000416821 482 ntBASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 RPL7P10-201ENST00000417407 739 ntBASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 AC005517.2-201ENST00000424673 553 ntBASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 AC079781.1-201ENST00000441505 394 ntBASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 AL031316.1-202ENST00000441672 449 ntTSL 3 BASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 AL929410.2-201ENST00000451170 189 ntBASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 EIF3LP2-201ENST00000457262 807 ntBASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 AC068587.1-201ENST00000483613 781 ntBASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 HMGN2P25-201ENST00000486956 268 ntBASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 Y_RNA.668-201ENST00000516233 93 ntBASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 RN7SKP31-201ENST00000516354 278 ntBASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 AC022868.1-201ENST00000517767 391 ntBASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 HABP2-203ENST00000542051 2972 ntAPPRIS ALT2 TSL 2 BASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 ATP5F1P7-201ENST00000567330 760 ntBASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 AC053481.3-201ENST00000577881 843 ntBASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 ARGFXP2-201ENST00000579304 949 ntBASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 AC098479.1-201ENST00000609225 154 ntBASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 AC062037.2-201ENST00000610137 73 ntBASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 NOTCH2-207ENST00000602566 5046 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 AC007485.2-201ENST00000623493 1667 ntBASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 SCN11A-201ENST00000302328 6500 ntAPPRIS P2 TSL 5 BASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 GSTO2-202ENST00000369707 6423 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 NLRC4-204ENST00000404025 3581 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 PLAGL1-205ENST00000392307 6296 ntTSL 2 BASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 VEPH1-201ENST00000362010 4202 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 CD163-203ENST00000432237 3701 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 AC132825.1-201ENST00000463573 2247 ntBASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 COL6A6-201ENST00000358511 9581 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
TRIM35Q9UPQ4 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 VN2R3P-201ENST00000422626 1412 ntBASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 AC092725.2-201ENST00000567658 1389 ntBASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 Y_RNA.112-201ENST00000363250 102 ntBASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 U8.3-201ENST00000363321 132 ntBASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 TRBV9-201ENST00000390363 390 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 EI24P3-201ENST00000399046 1062 ntBASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 AL354890.1-201ENST00000413730 346 ntBASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 NDUFB4P5-201ENST00000415445 361 ntBASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 AC118470.1-201ENST00000419891 453 ntAPPRIS P1 TSL 3 BASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 AC133104.1-201ENST00000429100 218 ntBASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 AL353803.3-201ENST00000444641 335 ntBASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 AL512649.2-201ENST00000446206 597 ntTSL 3 BASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 RN7SL180P-201ENST00000466769 294 ntBASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 RN7SL392P-201ENST00000473024 299 ntBASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 RPL29P23-201ENST00000486188 442 ntBASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 RNU6-1143P-201ENST00000516125 104 ntBASIC9.65□□□□□ -0.86
TRIM35Q9UPQ4 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC9.65□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 136.5 ms