Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
VPS29Q9UBQ0 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
VPS29Q9UBQ0 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VPS29Q9UBQ0 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
VPS29Q9UBQ0 MIR600-201ENST00000385007 98 ntBASIC4.93□□□□□ -1.62
VPS29Q9UBQ0 OR3A2-201ENST00000408891 1076 ntBASIC4.93□□□□□ -1.62
VPS29Q9UBQ0 RN7SKP59-201ENST00000410520 314 ntBASIC4.93□□□□□ -1.62
VPS29Q9UBQ0 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.93□□□□□ -1.62
VPS29Q9UBQ0 AL445213.1-201ENST00000412589 747 ntBASIC4.93□□□□□ -1.62
VPS29Q9UBQ0 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.93□□□□□ -1.62
VPS29Q9UBQ0 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.93□□□□□ -1.62
VPS29Q9UBQ0 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC4.93□□□□□ -1.62
VPS29Q9UBQ0 AC004980.3-201ENST00000447046 365 ntBASIC4.93□□□□□ -1.62
VPS29Q9UBQ0 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.93□□□□□ -1.62
VPS29Q9UBQ0 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC4.93□□□□□ -1.62
VPS29Q9UBQ0 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.93□□□□□ -1.62
VPS29Q9UBQ0 AC091180.1-201ENST00000462104 372 ntBASIC4.93□□□□□ -1.62
VPS29Q9UBQ0 AC020779.1-201ENST00000478757 796 ntBASIC4.93□□□□□ -1.62
VPS29Q9UBQ0 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VPS29Q9UBQ0 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VPS29Q9UBQ0 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.93□□□□□ -1.62
VPS29Q9UBQ0 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.93□□□□□ -1.62
VPS29Q9UBQ0 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.93□□□□□ -1.62
VPS29Q9UBQ0 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC4.93□□□□□ -1.62
VPS29Q9UBQ0 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC4.93□□□□□ -1.62
VPS29Q9UBQ0 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
VPS29Q9UBQ0 AL049779.2-201ENST00000553847 315 ntBASIC4.93□□□□□ -1.62
VPS29Q9UBQ0 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
VPS29Q9UBQ0 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.93□□□□□ -1.62
VPS29Q9UBQ0 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.93□□□□□ -1.62
VPS29Q9UBQ0 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.93□□□□□ -1.62
VPS29Q9UBQ0 AC090527.3-201ENST00000619041 548 ntBASIC4.93□□□□□ -1.62
VPS29Q9UBQ0 BX005214.3-202ENST00000619809 325 ntBASIC4.93□□□□□ -1.62
VPS29Q9UBQ0 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC4.93□□□□□ -1.62
VPS29Q9UBQ0 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.93□□□□□ -1.62
VPS29Q9UBQ0 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.93□□□□□ -1.62
VPS29Q9UBQ0 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
VPS29Q9UBQ0 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC4.93□□□□□ -1.62
VPS29Q9UBQ0 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 TCP11X1-202ENST00000622971 1372 ntBASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 MAPK10-338ENST00000641647 3362 ntBASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 RNA5SP183-201ENST00000362452 119 ntBASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 SNORA11.5-201ENST00000408163 128 ntBASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 RN7SKP16-201ENST00000410180 299 ntBASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 AC104333.2-201ENST00000422630 192 ntBASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 EI24P4-201ENST00000423683 1078 ntBASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 AL139148.1-201ENST00000427122 680 ntBASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 GAPDHP34-201ENST00000432112 823 ntBASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 AC090589.1-201ENST00000473109 362 ntBASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 SIAH1P1-201ENST00000479411 923 ntBASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 RPL7P39-201ENST00000481157 744 ntBASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 AC005412.2-201ENST00000492004 341 ntBASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 RNA5SP362-201ENST00000516048 118 ntBASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 AC134349.2-201ENST00000535136 910 ntBASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 FKBP1AP1-201ENST00000594588 318 ntBASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 AC099654.11-201ENST00000638857 294 ntBASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 CASC19-264ENST00000641912 1184 ntBASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 AC235565.1-201ENST00000456962 1325 ntBASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.92□□□□□ -1.62
VPS29Q9UBQ0 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
VPS29Q9UBQ0 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
VPS29Q9UBQ0 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
VPS29Q9UBQ0 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
VPS29Q9UBQ0 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
VPS29Q9UBQ0 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.91□□□□□ -1.62
VPS29Q9UBQ0 RN7SKP113-201ENST00000363891 295 ntBASIC4.91□□□□□ -1.62
VPS29Q9UBQ0 U3.32-201ENST00000408116 212 ntBASIC4.91□□□□□ -1.62
VPS29Q9UBQ0 AC108075.1-201ENST00000424692 529 ntBASIC4.91□□□□□ -1.62
VPS29Q9UBQ0 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
VPS29Q9UBQ0 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.91□□□□□ -1.62
VPS29Q9UBQ0 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 154 ms