Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.88□□□□□ -1.63
VAPAQ9P0L0 TTC39DP-201ENST00000416781 1688 ntBASIC4.88□□□□□ -1.63
VAPAQ9P0L0 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.88□□□□□ -1.63
VAPAQ9P0L0 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VAPAQ9P0L0 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VAPAQ9P0L0 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VAPAQ9P0L0 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.88□□□□□ -1.63
VAPAQ9P0L0 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VAPAQ9P0L0 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VAPAQ9P0L0 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.88□□□□□ -1.63
VAPAQ9P0L0 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
VAPAQ9P0L0 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VAPAQ9P0L0 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.87□□□□□ -1.63
VAPAQ9P0L0 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.87□□□□□ -1.63
VAPAQ9P0L0 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VAPAQ9P0L0 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VAPAQ9P0L0 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC4.87□□□□□ -1.63
VAPAQ9P0L0 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.87□□□□□ -1.63
VAPAQ9P0L0 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
VAPAQ9P0L0 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VAPAQ9P0L0 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
VAPAQ9P0L0 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VAPAQ9P0L0 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VAPAQ9P0L0 U3.3-201ENST00000362986 216 ntBASIC4.87□□□□□ -1.63
VAPAQ9P0L0 AC013442.1-201ENST00000397347 228 ntBASIC4.87□□□□□ -1.63
VAPAQ9P0L0 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.87□□□□□ -1.63
VAPAQ9P0L0 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.87□□□□□ -1.63
VAPAQ9P0L0 RPS3P2-201ENST00000421346 701 ntBASIC4.87□□□□□ -1.63
VAPAQ9P0L0 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.87□□□□□ -1.63
VAPAQ9P0L0 AC064862.4-201ENST00000442180 334 ntBASIC4.87□□□□□ -1.63
VAPAQ9P0L0 HMGN1P2-201ENST00000445197 310 ntBASIC4.87□□□□□ -1.63
VAPAQ9P0L0 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.87□□□□□ -1.63
VAPAQ9P0L0 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VAPAQ9P0L0 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.87□□□□□ -1.63
VAPAQ9P0L0 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VAPAQ9P0L0 RN7SL168P-201ENST00000463821 279 ntBASIC4.87□□□□□ -1.63
VAPAQ9P0L0 RN7SL591P-201ENST00000496150 292 ntBASIC4.87□□□□□ -1.63
VAPAQ9P0L0 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC4.87□□□□□ -1.63
VAPAQ9P0L0 PSMA2P2-201ENST00000504319 686 ntBASIC4.87□□□□□ -1.63
VAPAQ9P0L0 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.87□□□□□ -1.63
VAPAQ9P0L0 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC4.87□□□□□ -1.63
VAPAQ9P0L0 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC4.87□□□□□ -1.63
VAPAQ9P0L0 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.87□□□□□ -1.63
VAPAQ9P0L0 AC005363.1-201ENST00000530779 351 ntBASIC4.87□□□□□ -1.63
VAPAQ9P0L0 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VAPAQ9P0L0 AC024405.1-201ENST00000532521 1042 ntBASIC4.87□□□□□ -1.63
VAPAQ9P0L0 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC4.87□□□□□ -1.63
VAPAQ9P0L0 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.87□□□□□ -1.63
VAPAQ9P0L0 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
VAPAQ9P0L0 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.87□□□□□ -1.63
VAPAQ9P0L0 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.87□□□□□ -1.63
VAPAQ9P0L0 MIR4271-201ENST00000582451 67 ntBASIC4.87□□□□□ -1.63
VAPAQ9P0L0 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC4.87□□□□□ -1.63
VAPAQ9P0L0 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.87□□□□□ -1.63
VAPAQ9P0L0 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.87□□□□□ -1.63
VAPAQ9P0L0 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC4.87□□□□□ -1.63
VAPAQ9P0L0 AC010245.2-201ENST00000606908 1167 ntBASIC4.87□□□□□ -1.63
VAPAQ9P0L0 AP005131.7-201ENST00000610087 611 ntBASIC4.87□□□□□ -1.63
VAPAQ9P0L0 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VAPAQ9P0L0 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.87□□□□□ -1.63
VAPAQ9P0L0 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VAPAQ9P0L0 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VAPAQ9P0L0 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
VAPAQ9P0L0 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VAPAQ9P0L0 CDC27P2-201ENST00000425026 1922 ntBASIC4.87□□□□□ -1.63
VAPAQ9P0L0 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.87□□□□□ -1.63
VAPAQ9P0L0 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
VAPAQ9P0L0 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
VAPAQ9P0L0 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.87□□□□□ -1.63
VAPAQ9P0L0 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.87□□□□□ -1.63
VAPAQ9P0L0 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
VAPAQ9P0L0 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VAPAQ9P0L0 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.86□□□□□ -1.63
VAPAQ9P0L0 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
VAPAQ9P0L0 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.86□□□□□ -1.63
VAPAQ9P0L0 AC021242.1-201ENST00000507315 2035 ntBASIC4.86□□□□□ -1.63
VAPAQ9P0L0 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
VAPAQ9P0L0 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
VAPAQ9P0L0 AC013429.2-201ENST00000418798 781 ntBASIC4.86□□□□□ -1.63
VAPAQ9P0L0 OR2AH1P-201ENST00000425717 928 ntBASIC4.86□□□□□ -1.63
VAPAQ9P0L0 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.86□□□□□ -1.63
VAPAQ9P0L0 NPM1P48-201ENST00000436002 853 ntBASIC4.86□□□□□ -1.63
VAPAQ9P0L0 AC012075.1-201ENST00000436549 580 ntBASIC4.86□□□□□ -1.63
VAPAQ9P0L0 RPL36AP39-201ENST00000445859 318 ntBASIC4.86□□□□□ -1.63
VAPAQ9P0L0 AL356981.1-201ENST00000454879 684 ntBASIC4.86□□□□□ -1.63
VAPAQ9P0L0 AC019084.1-201ENST00000457337 432 ntBASIC4.86□□□□□ -1.63
VAPAQ9P0L0 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.86□□□□□ -1.63
VAPAQ9P0L0 RPL35AP19-201ENST00000469425 329 ntBASIC4.86□□□□□ -1.63
VAPAQ9P0L0 AC020779.1-201ENST00000478757 796 ntBASIC4.86□□□□□ -1.63
VAPAQ9P0L0 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.86□□□□□ -1.63
VAPAQ9P0L0 RPEP1-201ENST00000504507 658 ntBASIC4.86□□□□□ -1.63
VAPAQ9P0L0 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC4.86□□□□□ -1.63
VAPAQ9P0L0 OR8A2P-201ENST00000528631 952 ntBASIC4.86□□□□□ -1.63
VAPAQ9P0L0 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC4.86□□□□□ -1.63
VAPAQ9P0L0 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.86□□□□□ -1.63
VAPAQ9P0L0 AC107958.1-201ENST00000556576 290 ntBASIC4.86□□□□□ -1.63
VAPAQ9P0L0 AGGF1P9-201ENST00000561884 913 ntBASIC4.86□□□□□ -1.63
VAPAQ9P0L0 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.86□□□□□ -1.63
VAPAQ9P0L0 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC4.86□□□□□ -1.63
VAPAQ9P0L0 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms