Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 SAMMSON-227ENST00000642114 1199 ntBASIC5.43□□□□□ -1.54
CISHQ9NSE2 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CISHQ9NSE2 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CISHQ9NSE2 AC092376.2-201ENST00000622621 4116 ntBASIC5.43□□□□□ -1.54
CISHQ9NSE2 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CISHQ9NSE2 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CISHQ9NSE2 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.43□□□□□ -1.54
CISHQ9NSE2 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CISHQ9NSE2 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CISHQ9NSE2 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.43□□□□□ -1.54
CISHQ9NSE2 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CISHQ9NSE2 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CISHQ9NSE2 SCARNA15-201ENST00000607520 4325 ntBASIC5.42□□□□□ -1.54
CISHQ9NSE2 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CISHQ9NSE2 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5.42□□□□□ -1.54
CISHQ9NSE2 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC5.42□□□□□ -1.54
CISHQ9NSE2 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CISHQ9NSE2 AC063976.2-201ENST00000425667 3556 ntBASIC5.42□□□□□ -1.54
CISHQ9NSE2 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
CISHQ9NSE2 RNU4-34P-201ENST00000410431 124 ntBASIC5.42□□□□□ -1.54
CISHQ9NSE2 DPPA2P3-201ENST00000411853 655 ntBASIC5.42□□□□□ -1.54
CISHQ9NSE2 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CISHQ9NSE2 MRPS21P3-201ENST00000436696 262 ntBASIC5.42□□□□□ -1.54
CISHQ9NSE2 AC004980.3-201ENST00000447046 365 ntBASIC5.42□□□□□ -1.54
CISHQ9NSE2 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC5.42□□□□□ -1.54
CISHQ9NSE2 AC004815.1-201ENST00000484185 331 ntBASIC5.42□□□□□ -1.54
CISHQ9NSE2 HMGN2P25-201ENST00000486956 268 ntBASIC5.42□□□□□ -1.54
CISHQ9NSE2 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC5.42□□□□□ -1.54
CISHQ9NSE2 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.42□□□□□ -1.54
CISHQ9NSE2 AC010350.1-201ENST00000504908 231 ntBASIC5.42□□□□□ -1.54
CISHQ9NSE2 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC5.42□□□□□ -1.54
CISHQ9NSE2 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.42□□□□□ -1.54
CISHQ9NSE2 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC5.42□□□□□ -1.54
CISHQ9NSE2 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC5.42□□□□□ -1.54
CISHQ9NSE2 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.42□□□□□ -1.54
CISHQ9NSE2 AC019322.1-201ENST00000571869 389 ntBASIC5.42□□□□□ -1.54
CISHQ9NSE2 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.42□□□□□ -1.54
CISHQ9NSE2 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.42□□□□□ -1.54
CISHQ9NSE2 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.42□□□□□ -1.54
CISHQ9NSE2 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.42□□□□□ -1.54
CISHQ9NSE2 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.42□□□□□ -1.54
CISHQ9NSE2 AC105254.2-201ENST00000603636 436 ntBASIC5.42□□□□□ -1.54
CISHQ9NSE2 AC016769.4-201ENST00000616893 535 ntBASIC5.42□□□□□ -1.54
CISHQ9NSE2 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC5.42□□□□□ -1.54
CISHQ9NSE2 NXF4-202ENST00000416098 1465 ntBASIC5.42□□□□□ -1.54
CISHQ9NSE2 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.42□□□□□ -1.54
CISHQ9NSE2 THAP12P4-201ENST00000528321 2266 ntBASIC5.42□□□□□ -1.54
CISHQ9NSE2 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CISHQ9NSE2 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CISHQ9NSE2 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
CISHQ9NSE2 AP001157.1-201ENST00000550837 2339 ntBASIC5.42□□□□□ -1.54
CISHQ9NSE2 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CISHQ9NSE2 AC109780.1-201ENST00000451768 1344 ntBASIC5.42□□□□□ -1.54
CISHQ9NSE2 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CISHQ9NSE2 AC026523.2-201ENST00000625039 7739 ntBASIC5.42□□□□□ -1.54
CISHQ9NSE2 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.42□□□□□ -1.54
CISHQ9NSE2 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CISHQ9NSE2 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
CISHQ9NSE2 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CISHQ9NSE2 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.41□□□□□ -1.54
CISHQ9NSE2 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.41□□□□□ -1.54
CISHQ9NSE2 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CISHQ9NSE2 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CISHQ9NSE2 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CISHQ9NSE2 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CISHQ9NSE2 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.41□□□□□ -1.54
CISHQ9NSE2 MIR765-201ENST00000390226 114 ntBASIC5.41□□□□□ -1.54
CISHQ9NSE2 SNORA77-201ENST00000408716 125 ntBASIC5.41□□□□□ -1.54
CISHQ9NSE2 Z68694.1-201ENST00000413929 841 ntBASIC5.41□□□□□ -1.54
CISHQ9NSE2 RPL34P20-201ENST00000442771 351 ntBASIC5.41□□□□□ -1.54
CISHQ9NSE2 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC5.41□□□□□ -1.54
CISHQ9NSE2 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC5.41□□□□□ -1.54
CISHQ9NSE2 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.41□□□□□ -1.54
CISHQ9NSE2 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CISHQ9NSE2 AC245028.2-201ENST00000458673 253 ntBASIC5.41□□□□□ -1.54
CISHQ9NSE2 RN7SL441P-201ENST00000492388 296 ntBASIC5.41□□□□□ -1.54
CISHQ9NSE2 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.41□□□□□ -1.54
CISHQ9NSE2 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.41□□□□□ -1.54
CISHQ9NSE2 NDUFB4P11-201ENST00000560510 395 ntBASIC5.41□□□□□ -1.54
CISHQ9NSE2 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.41□□□□□ -1.54
CISHQ9NSE2 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.41□□□□□ -1.54
CISHQ9NSE2 SDR42E1P1-201ENST00000611327 477 ntBASIC5.41□□□□□ -1.54
CISHQ9NSE2 AC009163.6-201ENST00000612367 342 ntBASIC5.41□□□□□ -1.54
CISHQ9NSE2 AL627230.1-201ENST00000613077 211 ntBASIC5.41□□□□□ -1.54
CISHQ9NSE2 AL591926.8-201ENST00000616876 211 ntBASIC5.41□□□□□ -1.54
CISHQ9NSE2 AC004817.4-201ENST00000602396 3625 ntBASIC5.41□□□□□ -1.54
CISHQ9NSE2 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
CISHQ9NSE2 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CISHQ9NSE2 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CISHQ9NSE2 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
CISHQ9NSE2 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CISHQ9NSE2 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.4□□□□□ -1.54
CISHQ9NSE2 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.4□□□□□ -1.54
CISHQ9NSE2 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
CISHQ9NSE2 MAPK10-328ENST00000641553 4009 ntBASIC5.4□□□□□ -1.54
CISHQ9NSE2 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.4□□□□□ -1.54
CISHQ9NSE2 RNA5SP187-201ENST00000384400 119 ntBASIC5.4□□□□□ -1.54
CISHQ9NSE2 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.4□□□□□ -1.54
CISHQ9NSE2 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC5.4□□□□□ -1.54
CISHQ9NSE2 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms