Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.51□□□□□ -1.53
SIX2Q9NPC8 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SIX2Q9NPC8 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.51□□□□□ -1.53
SIX2Q9NPC8 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SIX2Q9NPC8 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
SIX2Q9NPC8 AL589826.1-201ENST00000340697 249 ntBASIC5.51□□□□□ -1.53
SIX2Q9NPC8 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.51□□□□□ -1.53
SIX2Q9NPC8 SNORA2.3-201ENST00000383920 135 ntBASIC5.51□□□□□ -1.53
SIX2Q9NPC8 NPM1P4-201ENST00000414095 812 ntBASIC5.51□□□□□ -1.53
SIX2Q9NPC8 ZNF92P1Y-201ENST00000415010 1191 ntBASIC5.51□□□□□ -1.53
SIX2Q9NPC8 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC5.51□□□□□ -1.53
SIX2Q9NPC8 AC104333.2-201ENST00000422630 192 ntBASIC5.51□□□□□ -1.53
SIX2Q9NPC8 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.51□□□□□ -1.53
SIX2Q9NPC8 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.51□□□□□ -1.53
SIX2Q9NPC8 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.51□□□□□ -1.53
SIX2Q9NPC8 GAPDHP34-201ENST00000432112 823 ntBASIC5.51□□□□□ -1.53
SIX2Q9NPC8 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.51□□□□□ -1.53
SIX2Q9NPC8 BTF3P6-201ENST00000448054 499 ntBASIC5.51□□□□□ -1.53
SIX2Q9NPC8 RNU6-964P-201ENST00000516524 69 ntBASIC5.51□□□□□ -1.53
SIX2Q9NPC8 RNU4-18P-201ENST00000516751 149 ntBASIC5.51□□□□□ -1.53
SIX2Q9NPC8 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.51□□□□□ -1.53
SIX2Q9NPC8 IGLVIV-64-201ENST00000518581 301 ntBASIC5.51□□□□□ -1.53
SIX2Q9NPC8 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.51□□□□□ -1.53
SIX2Q9NPC8 LSM3P2-201ENST00000551246 273 ntBASIC5.51□□□□□ -1.53
SIX2Q9NPC8 AC234775.3-201ENST00000564612 656 ntBASIC5.51□□□□□ -1.53
SIX2Q9NPC8 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.51□□□□□ -1.53
SIX2Q9NPC8 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC5.51□□□□□ -1.53
SIX2Q9NPC8 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.51□□□□□ -1.53
SIX2Q9NPC8 AC245128.3-201ENST00000594721 748 ntBASIC5.51□□□□□ -1.53
SIX2Q9NPC8 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.51□□□□□ -1.53
SIX2Q9NPC8 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.51□□□□□ -1.53
SIX2Q9NPC8 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.51□□□□□ -1.53
SIX2Q9NPC8 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.51□□□□□ -1.53
SIX2Q9NPC8 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
SIX2Q9NPC8 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
SIX2Q9NPC8 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
SIX2Q9NPC8 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.51□□□□□ -1.53
SIX2Q9NPC8 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
SIX2Q9NPC8 AP005435.3-201ENST00000531260 3198 ntBASIC5.51□□□□□ -1.53
SIX2Q9NPC8 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SIX2Q9NPC8 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SIX2Q9NPC8 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.5□□□□□ -1.53
SIX2Q9NPC8 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
SIX2Q9NPC8 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.5□□□□□ -1.53
SIX2Q9NPC8 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
SIX2Q9NPC8 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
SIX2Q9NPC8 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC5.5□□□□□ -1.53
SIX2Q9NPC8 AC099654.3-201ENST00000447087 1546 ntBASIC5.5□□□□□ -1.53
SIX2Q9NPC8 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SIX2Q9NPC8 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
SIX2Q9NPC8 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SIX2Q9NPC8 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.5□□□□□ -1.53
SIX2Q9NPC8 MIR323A-201ENST00000362199 86 ntBASIC5.5□□□□□ -1.53
SIX2Q9NPC8 RNU1-43P-201ENST00000365052 165 ntBASIC5.5□□□□□ -1.53
SIX2Q9NPC8 DUTP5-201ENST00000406790 469 ntBASIC5.5□□□□□ -1.53
SIX2Q9NPC8 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.5□□□□□ -1.53
SIX2Q9NPC8 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC5.5□□□□□ -1.53
SIX2Q9NPC8 COX6CP13-201ENST00000428703 226 ntBASIC5.5□□□□□ -1.53
SIX2Q9NPC8 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.5□□□□□ -1.53
SIX2Q9NPC8 CYCSP24-201ENST00000445119 316 ntBASIC5.5□□□□□ -1.53
SIX2Q9NPC8 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.5□□□□□ -1.53
SIX2Q9NPC8 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.5□□□□□ -1.53
SIX2Q9NPC8 AC002075.1-201ENST00000457396 676 ntBASIC5.5□□□□□ -1.53
SIX2Q9NPC8 AL049829.1-201ENST00000465411 156 ntBASIC5.5□□□□□ -1.53
SIX2Q9NPC8 AC009127.1-201ENST00000467090 155 ntBASIC5.5□□□□□ -1.53
SIX2Q9NPC8 HESX1-202ENST00000473921 757 ntTSL 5 BASIC5.5□□□□□ -1.53
SIX2Q9NPC8 RN7SL441P-201ENST00000492388 296 ntBASIC5.5□□□□□ -1.53
SIX2Q9NPC8 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC5.5□□□□□ -1.53
SIX2Q9NPC8 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC5.5□□□□□ -1.53
SIX2Q9NPC8 AP002981.1-201ENST00000517692 975 ntBASIC5.5□□□□□ -1.53
SIX2Q9NPC8 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SIX2Q9NPC8 AC024940.3-201ENST00000538551 316 ntBASIC5.5□□□□□ -1.53
SIX2Q9NPC8 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC5.5□□□□□ -1.53
SIX2Q9NPC8 AL512310.9-201ENST00000553311 948 ntBASIC5.5□□□□□ -1.53
SIX2Q9NPC8 AC103968.1-201ENST00000557841 573 ntBASIC5.5□□□□□ -1.53
SIX2Q9NPC8 AC067805.1-201ENST00000559344 470 ntBASIC5.5□□□□□ -1.53
SIX2Q9NPC8 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SIX2Q9NPC8 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.5□□□□□ -1.53
SIX2Q9NPC8 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SIX2Q9NPC8 AP000919.1-201ENST00000582850 985 ntBASIC5.5□□□□□ -1.53
SIX2Q9NPC8 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC5.5□□□□□ -1.53
SIX2Q9NPC8 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.5□□□□□ -1.53
SIX2Q9NPC8 AC009303.3-201ENST00000591103 736 ntBASIC5.5□□□□□ -1.53
SIX2Q9NPC8 AC002069.2-201ENST00000603580 883 ntBASIC5.5□□□□□ -1.53
SIX2Q9NPC8 AL136370.1-201ENST00000608166 691 ntBASIC5.5□□□□□ -1.53
SIX2Q9NPC8 AL133445.2-201ENST00000611191 527 ntBASIC5.5□□□□□ -1.53
SIX2Q9NPC8 MIR6837-201ENST00000620884 64 ntBASIC5.5□□□□□ -1.53
SIX2Q9NPC8 AP000648.2-201ENST00000624182 404 ntBASIC5.5□□□□□ -1.53
SIX2Q9NPC8 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.5□□□□□ -1.53
SIX2Q9NPC8 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SIX2Q9NPC8 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
SIX2Q9NPC8 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.5□□□□□ -1.53
SIX2Q9NPC8 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
SIX2Q9NPC8 TET1P1-201ENST00000426627 2301 ntBASIC5.49□□□□□ -1.53
SIX2Q9NPC8 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
SIX2Q9NPC8 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.49□□□□□ -1.53
SIX2Q9NPC8 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SIX2Q9NPC8 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.49□□□□□ -1.53
SIX2Q9NPC8 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
SIX2Q9NPC8 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms